Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g0684 | ATGTTAATTGAGATGGGTTCTTGTGGGGATTCAGCTATGGTTGATGATGGAATATCAGGTGGGTCTGTTATTGAGCAGCATTTGTGCTCGGAGATTCCCGTGCATTCGGATCATTTGCAGAAACAGTTGTGTTCAGAAGGAGCTTGTAGTGTGTTGTACTCTGATGAGCTTAGCAGCTTGAAGGATGGCAGTGTGGATTTACCCCAGGAGGGTTCTGCAAGCGGCGGTGCTGTTGTTGCAGATGTTGAGCTTCACAGGGCGAAGGATGGAAGTGTGGATTTACCCCAGGAGGGCCCTGAGGGTTCTCTAAGCGGCGGTGCTGTTGTTACGGATGTTGAGCTTCACAGGGCGAAGGGTAGTGTGGATTTACCCCAGGAGGGCCCTGAGTGTTCTACAAGCGGCAGTGATGTTCCGGACAAGTGTGGAGATGTCTTGCCAAATGAATGTGGAAATGCTGATATGTTGCAATTGGAGAACACCTCTGAGCATGATTGTCAGAATCATTCAAGGATATGTTGTGGGAACAACGAGGGTTCAGGTCTAAAAACTAGGGGGCTGTGTTCGGAAGGAAATTTTCAAGATGAAGGCGACACAGACATTCCATCGGAGTCCATAACTGTGACTGGGTTGCAGGAGCATTGTGTTCAACACGTTGTGCAGAAGGATGAGAAGCTCAATGTATTCCCCTCAGTGAATGATGATTCAGCTGTCATGGGAGGCAAAAATGATGACTCCAGTGTACTTGTGGATGCTTTGGATTGTGTGCATGATTTCAGACATTCTGAAATGTCCTTGGAATCAGAACCCACGACTGACTTGCTAGTTGGTTGTGACCACAAAAATGAGCAGGGGGACATTGTGAGAAATGCAGATCCATTGTCAATGGGTGTGGAAAAATGTGATGCTTTTGATGGGATGGAATCCGATGCTTGCAGGCAGGCATCTCCTTTGCAGATGCAGGCTTTGGAAGTTCCAACAACTGTATGTACAGAGGAAGATAGCAGACGTGGTCAGCTATGTGATGTTAAATATGGTGATGATTGGAATAGTAGTATTGATGAAAAGATTAAAGCTTTTGTAGATAAGGAAAACATTGTTGATTCACATGTCCAAGTATTGTCCTCACCAGGCTGTCATAGGACCTTGGAGAGTTCACCTGTAGTTGATTCCCCTCCGGAGACTTCAGCGTTGGTCCAGGGTAATGTAATGAAGAATGATATCTTGCAAATAGATGAGAAGTTGTGTAAATTGAAGGACTCTCACTCAGAAGAAACTACCAACTATGCTCCTAGGAAACCTTTATATGCTGATTCAGATCAGCCCTCCATTGTTTTAGTCACCGATACCTCTTTGAAGGACACACATGATCTGCTTCCTAAGGGTGGTGTTGTTTCTGTCAATAACAGTAGTGCTATGGACACTGTTGGACAGACAGATAATGATGGAAAAGATACTGTGGAAGCTGATTTTTTTGCTCAAAGCATCCTATTGCCGTCTCAGAGGAATAGTAGAAGAAATAAAGTTGGTCGTAAGACACAAACAAAAAAAGCCTCAAGAAAATGCAACAAAGCTGATTTGACACATCCAGGAGGAGATATGAAGATAAACTTAGAGGTTGCTAGAAAGAAAAGAAGTTCTTTCTCCAAGCCGGCACGATCTTCTATCTGGGGATTGCTTGGGAGCATTGAACAATATTTTGAGCAAGATAATGAGCTTGGGATTAGTAAAGCCATGTGCCAAGAATTGGGGAATACTAGAAGCAAGCGTCAAGCAGGAAAAGCATTTAAGAACAGTGCAAGTTCTAGTTCTTCAAATGCAGGGCAGAAATGTCCAGTTCCAACAACTCGGGTCCGTCTAAAGATCAAGTTCGGGAAAGAAATTGATCTAAGTAGTTCAAATATTTTGATTCCAGAAATTGGCAATGCCTTTAATCCTGCTTCTGACATGGGGACTGGTTCAGGTTCTCAGAAAGTTGGAAGCAATGCGGAAGACAAATCTTTGGGACCGGTGTCCTTGGGCAATTTAGAAACCTTCAAAAGCAACCTCAAGAAGGATGATCTTGTACTAAATGCGCAAATTGCAACAAACCACTTAGAAAGTACTGCAAAAATTGAGAAGTCAAATGGGGATGTAGAGGCAAAGTTTCTTACAAATCCTCTAGAAAAGGTGGTAGAACCATTGATTGAACCAATCATTAATATGGATCCTGGAACTTCACCTGATTCAGAAGTCATCAATTCAGTTCCAGAAGTTCAAGTTGGAGAAAGACATCAAGAAGATATGCATCATGCTCTTTTAGGTCCTCCTTTGGATTTCAATTCTAATTTGCATATTACTATTAGCAAGAAGGGGAAGAAAAAAGACAAACATATTTCTTCAAGTGATTGTATTACTGAAGTTGGATCACATGGGCGACATAGAAGTAATAAAGCAAAACAATCAAAGAATCACAGATGTAAGAAGAATTCTAGTAATACAGTTAGCTTTTTAGAATTGCCTGCTTCCACTGAGATAAATGCTTCAAGCAAATCTATCAGTAGTGAAGAATTTCCGACAGAACCATTACCCCTTTCTGGTGAGAGTGAACTTGGAGACTCTGCTGAAGCTTTGAAGGTCCAAGGGTGCAAGCCATCTGTTAACCACAGGCCATCAGAACCCCAGGGTTCTGAGAATTTGCCGCCTTGTGTAAGATATTTGGGGCGTAAACTACCTAAAAGCCTTATGAGTGTTAAATTTAGCAAGGCCAAGTCTAAAGCTTCTGACTCAACAAAGAAAAAGATCACTTGTAGACACAAGGAGAAACAGAGAAGGCCAAATAGTAAAAGCGAAGTCAAGGGAAAAGGTGGCCCGCATAAAGTTATGGCAGAAGTGGAGGATCACATACATACAGCAACCAGCACAGTTGGAAATGGCAAATTGGATGCTGATCAAAGATTTAATGCTGATGGAAACAGAGTATCAGTTAATGTATCTAATTTGAACATATTGCCCACCATTGATTCGGGAGAGCAGCATAAATCACCACATAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGCATTCCAGCTGTGCTTGCTGACCTGATTGATGAGACAAACTGCACCTGGACATGCAAGGATAGCAAGGATAAAGACTTTGCTGATTGTGCTATCCCTCAGGAAAAGTCAAATGCAGAGATTAATGCAGAATTGGGATTATCGGATGAAGAAGATGCTTACGAAGACTCCAGAAATTATAAGGAATTGGAATTCCAACAGCCATTGGTTTCCCAGGAGTCGACTTTCACCCAAGTCCTTTCCAATGAGTTTCTACATCGTAGCCGTAAAACACAAACTATTGATGAGATAATGGTCTGCCATTGCAAACAACCTCAAGTAGGCAAGTTAGGCTGTGGGGATGAATGCCTAAACCGGATGCTAAACATTGAATGCGTTCAAGGAACCTGCCCATGTGGGGATTATTGTTCCAACCAGCAGTTCCAAAAACGCAAGTATGCCAGCTTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGACTGAAGGCACTTGAGAATATAGCCCAAGGCCAGTTTCTCATTGAATATGTTGGGGAGGTGCTTGATACTCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTGAAGGGTCATAGACATTTCTATTTTATGACCTTGAATGGAAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGCCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGAACAGAAAAGTGGATGGTGAATGGGGAAATATGTATTGGACTGTTCGCATTGAGGGATATTAAGCAGGATGAAGAAGTGACATTTGATTACAACTATGTAAGGGTTTTCGGTGCTGCTGCCAAAAAATGCTATTGTGGCTCAATTAATTGTCGAGGTTATATAGGTGGTGGTGATCCGTTAAATTCCGATTTGATAGTTCAAGGTGATTCTGATGAAGAATTTCCAGAACCTGTTATGCTTAATGATGATGGCGTAATTGAAAACGGGTTGCTTTCACGCAAGTTTACTATTGCGATAGACACAGATAATACTCCAGAGAAGGAGAGTTCTATGAACCCTTCCTCTGCTGTTGATTTGTTGCACAGCTCCATTGAAGAAAATTCAAAGGCCAAGGTACCATCTTCTGTTCGCGTTGAAGAAATTTCTCAACTAGTGGAGAATAGAGAAAGTAAAACCATGCCTGCTATGCAACAAGGGCATGCAATCGATCTTACGGACAAAACTACCTCCATTCAGAAAGATGAGAAACTTTCTTCCCTTGCACCTGTCAGAAAAGTCTTATTGAATGCTACCATCAGTAATAAGGAATTTAAGCCTGAAATAGTCAAGGCTCCTAAACTGGTTAGTTCTGTTAAAAGGGGAAAAGTTTGTGCTAATCCTCCAAACGGCCTCAAAATTGAGACAACAGTGAACCGATTGCAGTTGTCATCTGGGAAACTGAAAAAAGTTGTTGAAGGTTCTTCTAATGCAAGATTTGAAGCAGTCCAGGAGAAGCTTACGGAATTACTCGATGGAGATGGAGGAATAAGCAAAAGAAAAGATGCCACCAAAGGTTACTTGAAACTCTTGCTTCTCACTGTGGCATCAGGTGATAGGAGCAGCGGTGAAGCTATTCAAAGCAATCGAGATCTCTCGATGATCCTTGATGCCCTTCTAAAAACGAAATCTAGAGCAGTGCTAAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAAAATCATGAAGCAGTACAGGCGGGATTTCAAAAAAATTCCAATATTACGAAAGCTGCTTAAGGTGCTAGAGTATCTGGCTGTGGGCAAGATACTGACATTTGAACATATCAATGGTGGTCCCCCATGTCATGGAATGGAGAGCTTTAGGGAATCAATGCTGTCTCTGACAGAGCATGATGACAAACAGGTACATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCTAGGGCATCCAGAAAACATGGATATATGGACAGGGATGATAATAGAATGGAATCTCATAGAAGTTACAACAGTAACAGATTTTCATCATCACACAATCATAGGCATGAACAGGACTCTAGACCTACAGAAGCAGTGGATTGTGTTCCGATGTCAACATCCGTGGAAACTTCAGCTGATGCTGGTGCACCTGAGGGATCCTCCGCGCCCTCTCTAGATGGGGTTGATGTCAAAGGGACAAAAAAACGAAAGCGCAAAAGCCGGTGGGATCAACCAGCAGAGACAAATTCTTATTCCGATGCAGCAGTTATTGGTTCTACTGATGGAAGCCAGAACATTCATGAGGATGTTCCACCAGGATTTTCTTGTCCCGTAGGTGCTGGTGATCTTGCTCCGCGAAATGGAGTCCATTCTGGAAGTGCCCCTGACTTGGTTTTTGGTCAGCCAAAGGAGAAATTTAACTCTCGCTTGCCTGTCTCGTATGGAATCCCTTGCTCTGTTGTCAAGCAGTTCGGAACACCTCATGCTGAGATCTCGGGTAGTTGGGTCACTGCACCTGGAATGCCTTTCAACCCATTTCCTCCATTACCACCATATCCACGGGATCAAAGAGACTGTTTACCTTCCAATACTTCCAGCGCTATGGCAATTGACCAGCCTTCTGAAATCAAACAGTCAGATGGTAGTGGCCTAGTTAACAGTTGCGCAGACGATACTGTTCGCAGCACAACTGGCACTAACTCTGATGACATGAATCATACAGATGAGGAGAATCGAAACATAACTAAGCGATTGAAGGACGATGACCTGGGAAGGAGGTACTTTAGACAGCAGAAGTGGAACAATTCGAAAATACATCGACCTTGGTTCCGGAGGGATGCATGGAAATGCAATAATAGGAACAACACCAGTGGTGGTGATATGTGCGGTATGGGTGTAGGAAATGTACAATCTGAAGTTACAAGAAGCTCAGAGGATGCAATTTGTAGAGATGAGAAAGGTGGCAATAATATTTGTTAG | 6012 | 0.4261 | MLIEMGSCGDSAMVDDGISGGSVIEQHLCSEIPVHSDHLQKQLCSEGACSVLYSDELSSLKDGSVDLPQEGSASGGAVVADVELHRAKDGSVDLPQEGPEGSLSGGAVVTDVELHRAKGSVDLPQEGPECSTSGSDVPDKCGDVLPNECGNADMLQLENTSEHDCQNHSRICCGNNEGSGLKTRGLCSEGNFQDEGDTDIPSESITVTGLQEHCVQHVVQKDEKLNVFPSVNDDSAVMGGKNDDSSVLVDALDCVHDFRHSEMSLESEPTTDLLVGCDHKNEQGDIVRNADPLSMGVEKCDAFDGMESDACRQASPLQMQALEVPTTVCTEEDSRRGQLCDVKYGDDWNSSIDEKIKAFVDKENIVDSHVQVLSSPGCHRTLESSPVVDSPPETSALVQGNVMKNDILQIDEKLCKLKDSHSEETTNYAPRKPLYADSDQPSIVLVTDTSLKDTHDLLPKGGVVSVNNSSAMDTVGQTDNDGKDTVEADFFAQSILLPSQRNSRRNKVGRKTQTKKASRKCNKADLTHPGGDMKINLEVARKKRSSFSKPARSSIWGLLGSIEQYFEQDNELGISKAMCQELGNTRSKRQAGKAFKNSASSSSSNAGQKCPVPTTRVRLKIKFGKEIDLSSSNILIPEIGNAFNPASDMGTGSGSQKVGSNAEDKSLGPVSLGNLETFKSNLKKDDLVLNAQIATNHLESTAKIEKSNGDVEAKFLTNPLEKVVEPLIEPIINMDPGTSPDSEVINSVPEVQVGERHQEDMHHALLGPPLDFNSNLHITISKKGKKKDKHISSSDCITEVGSHGRHRSNKAKQSKNHRCKKNSSNTVSFLELPASTEINASSKSISSEEFPTEPLPLSGESELGDSAEALKVQGCKPSVNHRPSEPQGSENLPPCVRYLGRKLPKSLMSVKFSKAKSKASDSTKKKITCRHKEKQRRPNSKSEVKGKGGPHKVMAEVEDHIHTATSTVGNGKLDADQRFNADGNRVSVNVSNLNILPTIDSGEQHKSPHNAWVRCDDCHKWRRIPAVLADLIDETNCTWTCKDSKDKDFADCAIPQEKSNAEINAELGLSDEEDAYEDSRNYKELEFQQPLVSQESTFTQVLSNEFLHRSRKTQTIDEIMVCHCKQPQVGKLGCGDECLNRMLNIECVQGTCPCGDYCSNQQFQKRKYASLKWFKCGKKGYGLKALENIAQGQFLIEYVGEVLDTHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSINCRGYIGGGDPLNSDLIVQGDSDEEFPEPVMLNDDGVIENGLLSRKFTIAIDTDNTPEKESSMNPSSAVDLLHSSIEENSKAKVPSSVRVEEISQLVENRESKTMPAMQQGHAIDLTDKTTSIQKDEKLSSLAPVRKVLLNATISNKEFKPEIVKAPKLVSSVKRGKVCANPPNGLKIETTVNRLQLSSGKLKKVVEGSSNARFEAVQEKLTELLDGDGGISKRKDATKGYLKLLLLTVASGDRSSGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHKIMKQYRRDFKKIPILRKLLKVLEYLAVGKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRASRKHGYMDRDDNRMESHRSYNSNRFSSSHNHRHEQDSRPTEAVDCVPMSTSVETSADAGAPEGSSAPSLDGVDVKGTKKRKRKSRWDQPAETNSYSDAAVIGSTDGSQNIHEDVPPGFSCPVGAGDLAPRNGVHSGSAPDLVFGQPKEKFNSRLPVSYGIPCSVVKQFGTPHAEISGSWVTAPGMPFNPFPPLPPYPRDQRDCLPSNTSSAMAIDQPSEIKQSDGSGLVNSCADDTVRSTTGTNSDDMNHTDEENRNITKRLKDDDLGRRYFRQQKWNNSKIHRPWFRRDAWKCNNRNNTSGGDMCGMGVGNVQSEVTRSSEDAICRDEKGGNNIC* | 2004 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 840 | 861 | - | - | |
Amo08g0684 | 2003 | SMART | set_7 | 1169 | 1292 | IPR001214 | GO:0005515 | |
Amo08g0684 | 2003 | Gene3D | - | 1002 | 1063 | - | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 1886 | 1922 | - | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 1673 | 1779 | - | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 588 | 611 | - | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 502 | 529 | - | - | |
Amo08g0684 | 2003 | Pfam | SET domain | 1180 | 1286 | IPR001214 | GO:0005515 | |
Amo08g0684 | 2003 | Pfam | AWS domain | 1132 | 1166 | IPR006560 | GO:0005634|GO:0018024 | |
Amo08g0684 | 2003 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC | 499 | 1929 | - | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 1886 | 1913 | - | - | |
Amo08g0684 | 2003 | ProSiteProfiles | Zinc finger CW-type profile. | 1006 | 1060 | IPR011124 | GO:0008270 | |
Amo08g0684 | 2003 | ProSiteProfiles | AWS domain profile. | 1117 | 1167 | IPR006560 | GO:0005634|GO:0018024 | |
Amo08g0684 | 2003 | PANTHER | SET DOMAIN PROTEINS | 499 | 1929 | - | - | |
Amo08g0684 | 2003 | SMART | PostSET_3 | 1294 | 1310 | IPR003616 | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 788 | 806 | - | - | |
Amo08g0684 | 2003 | CDD | SET_SETD2 | 1168 | 1310 | IPR044437 | GO:0010452|GO:0046975 | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 1756 | 1777 | - | - | |
Amo08g0684 | 2003 | Gene3D | SET domain | 1064 | 1317 | IPR046341 | - | |
Amo08g0684 | 2003 | SMART | shorttest3 | 1117 | 1168 | IPR006560 | GO:0005634|GO:0018024 | |
Amo08g0684 | 2003 | SUPERFAMILY | SET domain | 1108 | 1307 | IPR046341 | - | |
Amo08g0684 | 2003 | ProSiteProfiles | SET domain profile. | 1169 | 1286 | IPR001214 | GO:0005515 | |
Amo08g0684 | 2003 | ProSiteProfiles | Post-SET domain profile. | 1294 | 1310 | IPR003616 | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 936 | 950 | - | - | |
Amo08g0684 | 2003 | Pfam | CW-type Zinc Finger | 1012 | 1058 | IPR011124 | GO:0008270 | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 911 | 950 | - | - | |
Amo08g0684 | 2003 | MobiDBLite | consensus disorder prediction | 781 | 824 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g0684 | Amo-Chr8 | 12095923 | 12115867 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g0684 | 1152 | 1309 | C2H2 Transcription Factor Family | AT2G23740 | 33.702 | 1.30e-20 | 97.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Amo08g0684 | SET | 6.2e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g0684 | - | - | adu:107460691 | 3950.21 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo08g0684 | 08 | 12095923 | 12115867 | Amo17g2670 | 17 | 126952639 | 126967878 | hybridization |