Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0679 ATGGGACTCTGCCATGGAAAACCCATTGAAACCTCACAGAGAGGAGTAGGAGGAAGAGGGGAAGACCCTTCATCATTCATTGATGAGAAAGGTGTGGTTGTTTCACTGCCACCACCAACACCAAGTTCCCAAACCACAAAACCCTCATCAAAGTTCCCATTTTTCAGCCCAAGCCCTTTGCCAAGCTTCTTCAAGAACTCACCTGCACCAGGTTCAAATCCTTCAAGTGTGAGTTCAACACCTTTGAGGATCTTCAAGAGGCCATTCCCTCCTCCTTCTCCGGCAAAGCACATAAGGGCTTTGCTTGCGAGGAGGCATGGCTCTGTGAAGCCCAATGAGGCATCAATTCCTGAAGGGAGTGAGTGTGAGGTTGGATTGGACAAGAGCTTTGGGTTCTCTAAGCAGTTTTTGGTTCACTATGAGCTTGGGGAAGAAGTGGGGCGTGGCCATTTTGGGTACACTTGCTCTGCCAAGGGTAAAAAAGGAACCTTCAAGGGCCATGAGGTTGCTGTCAAAGTCATCCCAAAAGCAAAGATGACAACTGCAATTGCTATTGAGGATGTGAGGAGAGAAGTAAAGATATTGCGAGCTTTAACCGGGCATAAAAACCTGGTACAATTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGCGAACTGCTAGATAAGATTCTTTCCAGAGGTGGAAAGTACTCAGAAGAGGATGCCAGGGTTGTCATGATTCAGATATTGAGTGTTGTAGCCTATTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTTTTTGCTTCTAAGGAAGAAAATTCCACTCTGAAGGCGATTGATTTTGGACTCTCCGACTATGTGAAGCCAGATGAGAGGTTGAATGATATTGTTGGAAGCGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCCTATATTCTTTTATGTGGAAGTCGACCATTTTGGGCACGGACGGAATCTGGCATATTTCGAGCTGTCCTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCCGCTGATGCAATAGATTTTGTAAAGAGGCTGTTGAACAAGGATTATCGAAAAAGACTAACTGCAGCTCAGGCACTCGGTCATCCGTGGCTGGCGAATCATTGCGATGATTTGAAGATACCTATTGACATGATAATCCCCAAGCAAGTTAAAGCTTATATATGCTCATCATCGTTACGTAAATCAGCGTTAGGGGCCCTTGCAAAGACATTAACATTAGTGCAGCTAGCTTATCTCAGAGAACAATTTACTCAGTTAGGACCAAACAAAAATGGGACAATTTCTATGCAGAATTTCAAGACGGGTGTTTTAAGGTGTGCCACTGATGCCTCAAAGGATTCTCGGGTCTTAGATTACGTGAGCATGGTTAGTTCAATCCAATATCGGAAATTAGATTTCGAGGAATTTTGTGCTGCTGCTATAAGTGTGCATCAGCTAGAGGGAATGGAGACCTGGGAACACCATGCAAGGCGTGCCTATGAGCTGTTCGAAAAGGATGGAAATAGGCCAATCATGATCGAAGAGCTAGCATCGGAACTTGGGCTTAGTCCATCAGTACCTGTCCATGTTGTACTCCAAGATTGGATAAGACACTCGGATGGGAAGCTTAGTTTCCTGGGGTTCGTCAGGCTTCTGCACGGAGCTTCTTCTCGCACGTTTCACAAAGCTTGA 1785 0.4471 MGLCHGKPIETSQRGVGGRGEDPSSFIDEKGVVVSLPPPTPSSQTTKPSSKFPFFSPSPLPSFFKNSPAPGSNPSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKSFGFSKQFLVHYELGEEVGRGHFGYTCSAKGKKGTFKGHEVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDKILSRGGKYSEEDARVVMIQILSVVAYCHLQGVVHRDLKPENFLFASKEENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALGHPWLANHCDDLKIPIDMIIPKQVKAYICSSSLRKSALGALAKTLTLVQLAYLREQFTQLGPNKNGTISMQNFKTGVLRCATDASKDSRVLDYVSMVSSIQYRKLDFEEFCAAAISVHQLEGMETWEHHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGASSRTFHKA* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0679 594 SUPERFAMILY Protein kinase-like (PK-like) 139 433 IPR011009 -
Amo08g0679 594 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0679 594 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Amo08g0679 594 CDD STKc_CAMK 139 401 - -
Amo08g0679 594 Gene3D Transferase(Phosphotransferase) domain 1 230 422 - -
Amo08g0679 594 PANTHER CDPK-RELATED KINASE 1 41 589 - -
Amo08g0679 594 MobiDBLite consensus disorder prediction 1 53 - -
Amo08g0679 594 MobiDBLite consensus disorder prediction 37 53 - -
Amo08g0679 594 Gene3D - 423 512 - -
Amo08g0679 594 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0679 594 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0679 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 589 - -
Amo08g0679 594 Gene3D - 428 582 - -
Amo08g0679 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Amo08g0679 594 Gene3D Phosphorylase Kinase; domain 1 133 229 - -
Amo08g0679 594 SUPERFAMILY EF-hand 432 584 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0679 Amo-Chr8 12003493 12008470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0679 40 590 EF-hand Containing Proteins AT3G50530 70.478 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo08g0679 Pkinase 4.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0679 - - gmx:100796678 1001.5