Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0676 ATGCCTTACCTTGTCCGCGAGAATCTCTTCATCGGAAACATCAGCGACGCGGCGGAGATCCTCCAGAACGGTGGAAGTGGCGGTGCTGCCGGAGGAGGAGACTTCACACACATACTCTCCGTCCTCAGCTCCGCCTCCATTTCCTTCTTCTCCGAATGGCGCCCATCCGTCTCCATCCCCGTAAAGGAGATCAACAAGGTCTACGTTTCCGGCGCCGGCAGCGGTGACTCCGGCAAGTGTGCCTTGTCGCCGGAGAAGCTCCTCTACTCTCTCGAGTACGCCGGACGTGACCTCAAGCTTGTGAGGATGGCGGTGCCTCTGAAGGACACGGAGAACGAGGACTTGCTTGATTACCTCGAAGTTTGCATCGACTTCATTGATCGTAGCAGGAAGGAAGGTTCCGTTTTGGTTCACTGCTTCGCCGGAGTTTCTAGAAGTGCGGCAGTGATTACGGCGTACTTGATGAGAATGGAAAATCTCTCTCTCGAAGATTCCCTTGAATCATTAAGGAAGAGCTATGAATTTGTTTGCCCCAATGATGGCTTTCTTGAGCAGTTGAGAATGTTCGAGGAGATGGGCTTCAAGGTTGATCACTCCAGTCCTATATATAAGCGCTTTCGTCTGAAAATACTTGGTGAGAGTCATTTCTCAGGGTCAAGAATAGACAGTTCTAAACTGGGTGCAGACCCTGGCATGCCTGTCCAAATTTCTTCAGATGTTGAAGGAGCTACTAAAGTAGAAACTAATAGGAGTCCTACATATCGCTGTAAGAAGTGCCGACGAATTGTTGCATTGCAAGAACATGTTGTAGATCACATTCCTGGTGAGGGTGAGACGTCCTTTGAGTGGCATAAGCGAAGAAGTGGCAATCCTTTCAACAAGTCTAATGAATCGTGTTCGTCCATATTTATTGAGCCTCTCCGGTGGATGAAAGCTGTTGAGGAAGGCGCATTGGAGGGAAAACTGTCATGCGTTCATTGCGATGCCCGTTTGGGATACTTCAACTGGGCAGGCATACAGTGCAGCTGCGGAAGCTGGATAACCCCAGCTTTTCAACTCCACAAAGGCCGTGTAGATATAAGCCCTGTATGA 1092 0.4982 MPYLVRENLFIGNISDAAEILQNGGSGGAAGGGDFTHILSVLSSASISFFSEWRPSVSIPVKEINKVYVSGAGSGDSGKCALSPEKLLYSLEYAGRDLKLVRMAVPLKDTENEDLLDYLEVCIDFIDRSRKEGSVLVHCFAGVSRSAAVITAYLMRMENLSLEDSLESLRKSYEFVCPNDGFLEQLRMFEEMGFKVDHSSPIYKRFRLKILGESHFSGSRIDSSKLGADPGMPVQISSDVEGATKVETNRSPTYRCKKCRRIVALQEHVVDHIPGEGETSFEWHKRRSGNPFNKSNESCSSIFIEPLRWMKAVEEGALEGKLSCVHCDARLGYFNWAGIQCSCGSWITPAFQLHKGRVDISPV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0676 363 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 171 IPR000387 GO:0016311|GO:0016791
Amo08g0676 363 CDD DSP_DUSP12 4 197 - -
Amo08g0676 363 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 98 193 IPR029021 -
Amo08g0676 363 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Amo08g0676 363 SMART dsp_5 1 192 IPR020422 GO:0006470|GO:0008138
Amo08g0676 363 Pfam Dual specificity phosphatase, catalytic domain 102 191 IPR000340 GO:0008138|GO:0016311
Amo08g0676 363 Gene3D Protein tyrosine phosphatase superfamily 4 212 IPR029021 -
Amo08g0676 363 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 195 IPR020422 GO:0006470|GO:0008138
Amo08g0676 363 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0676 Amo-Chr8 11986242 11989319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0676 100 191 Protein tyrosine phosphatase (PTP) family AT3G06110 36.559 2.45e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0676 K14819 - gmx:100804683 571.237