Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0651 CTGTCATGGCAAGCGTTCTTAGACAGCAGCAACAGCCAGCAGGGAGTGAAAAAAGGGTGGAAGAAGTTTCTGTCATTTATAGGGCCTGGTTTTCTAGTCTCTCTCGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCGATATGAGCTACTGTGGGTGATACTTATCGGATTGATATTTGCTCTTATTATTCAGTCATTAGCGGCAAATCTTGGCGTAAGCACAGGGAAACACCTTTCAGAGATATGCAAAGCGGAGTATCCAAGACTCGTTAGATACTGCTTATGGTTATTAGCTGAGCTTGCTGTCATAGCCGCAGACATTCCAGAAGTGATTGGAACGGCGTTTGCACTGAACATACTATTCCACATCCCAGTATGGGGAGGAGTTCTAGTGACTGGGTGCAGCACTCTGTTGCTTCTTGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAACGCTGGTATTTGTGATGGCAGCATGTTTCTTTGGAGAAATGAGTTACGTGAAACCACCAGCGTCTGGTGTCATAAAGGGCATGTTTACTCCCAAACTCAGTGGTCAAGGTGCCACTGCCGACGCCATTGCCCTTTTAGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTGGTGCTGTCTAGGAAAGTACCTAATACAGTTCGTGGCATCAATGACGCGTGTAAATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTGATCAACGTTGCAGTTATTTCTGTGTCTGGCACTGTTTGCTCAGCTTCAAATCTTTCTTCGGCAAACACTGATCATTGCACCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCTAGCTCAACGATTTATGCAATAGCACTATTAGCCTCAGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTAGACTTGAAGATGAAAAGATGGATTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGCGCCGGTCGACTAATCGTCATCGCATCGATGATACTTTCTTTTGAGCTTCCGTTTGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATAATTGTCATCTCATGGATCCTAGGATTGGGAATCATAGGCATCAATGTGTACTACCTCATCACTGCCTTCGTGGATTGGCTAATTCATAATAGTTTGCCAAAGGTGGGAAATGTGTTCATTGGGATCATAGTGTTTCCTCTGATGGCAATCTATGTCGGCTCAGTTATATACCTAACATTCAGAAAAGACACTGTTCAGACATATATTGAGACCAAGGATAACACAGCAATGCAAACCCATGTGGAAAAGGGGTTCATGAATTCTAATGGTGAGTTAGAGTTGAACCATGGCCCTATCAGAGAAGATTTAGCTGATATCCCACTACCGGAATAA 1557 0.4457 LSWQAFLDSSNSQQGVKKGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSEICKAEYPRLVRYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWGGVLVTGCSTLLLLGLQRFGVRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFTPKLSGQGATADAIALLGALVMPHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASNLSSANTDHCTDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWIRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVDWLIHNSLPKVGNVFIGIIVFPLMAIYVGSVIYLTFRKDTVQTYIETKDNTAMQTHVEKGFMNSNGELELNHGPIREDLADIPLPE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0651 518 PANTHER METAL TRANSPORTER NRAMP5 14 518 - -
Amo08g0651 518 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 21 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 Pfam Natural resistance-associated macrophage protein 44 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 Hamap Divalent metal cation transporter MntH [mntH]. 6 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 155 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 343 360 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 315 334 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 130 149 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 102 128 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PRINTS Natural resistance-associated macrophage protein signature 375 394 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0651 518 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 14 518 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0651 Amo-Chr8 11624776 11630677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0651 1 518 Inorganic Solute Cotransporters AT1G15960 58.925 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0651 K21398 - gmx:100787785 857.055