Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0634 ATGGGAGAAAGATTAGTGATGAGCAAGGCAAAGCCTTATTTGCTAACTGTGGGGCTTCAATTTGGATTGGCAGGAACCTACATATTCTCCATGGCCAGTCTCAACCATGGAATGAGTCGTTATGTCTTTGTTGTTTATCGCAATCTCATTGCTGCTATTTCCCTCGCTCCCTTTGCATTCTTTTTTGAAAGGAAGGTTAGGCCAAAGATGACACTCTCTGTCTTTATACGAATATTGGTTCTCGGGCTTCTGGAGCCAGTGATAGACCAAGGATTCACTTTCTTAGGGATGCAATATACTTCAGCTTCATTTGCATCTGCCATTATGAATGCTGTCCCATCCGTTACCTTTGTCCTAGCAGTCATTTTCAGAATAGAGCGCGTAAACGTGAAAGAGGTGCGAAGCCTAGCAAAGGTGATTGGGACATTGGTAACGTTTTGTGGCGCATTGGTGATGATACTCTACAAAGGCCCTATTATGAACCTTTTTGGTTCTTCACACGCAATCCATGATGATAATCATCACCACCATGATTCAACTCACTCCACTCACAGCCTCTCTCATTGGGTCTCTGGAACTCTCTTTCTTTTTCTCGGTTGTGTCGCTTGGTCATCCTTCTACGTGTTACAGTCTGTAACGTTGAAAAGTTACCCGGCCGAGATGTCATTGTCGTCCTTGATATGCTTGGCGGGTGCTTCGCAAGCTTCTGTCGTGGCTGCGGTGGCTGAGCATCACTCCGGCGCTCGCCCTTGGATCGTTGGTTGGGACTTTAGGCTTTATGGTCCTCTTTACTCGGGTATAGTTAGCTCAGCGATTGCGTATTACGCGCAAGGGTTGGTGTTACAAAGCAAAGGCCCAGTGTTTTTAACGGCATTTAATCCCCTTTGCATGATCATTGTTTCCGTCTTGGGCTATTTTCTTCTCTCTGAGACTCTTCACCTGGGCAGTATCATAGGAGCAATTATTATAGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGAAAAGACAGTTCTGACCCTACTATGACGCCGACCACAACAACAACTAAGCAAACAGAGTTGCAACAAAAACAACTCCCAATTACATCATCCGATATCTAA 1104 0.4529 MGERLVMSKAKPYLLTVGLQFGLAGTYIFSMASLNHGMSRYVFVVYRNLIAAISLAPFAFFFERKVRPKMTLSVFIRILVLGLLEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVIFRIERVNVKEVRSLAKVIGTLVTFCGALVMILYKGPIMNLFGSSHAIHDDNHHHHDSTHSTHSLSHWVSGTLFLFLGCVAWSSFYVLQSVTLKSYPAEMSLSSLICLAGASQASVVAAVAEHHSGARPWIVGWDFRLYGPLYSGIVSSAIAYYAQGLVLQSKGPVFLTAFNPLCMIIVSVLGYFLLSETLHLGSIIGAIIIAVGLYSVVWGKGKDSSDPTMTPTTTTTKQTELQQKQLPITSSDI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0634 367 MobiDBLite consensus disorder prediction 339 367 - -
Amo08g0634 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 336 - -
Amo08g0634 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 156 - -
Amo08g0634 367 PANTHER WAT1-RELATED PROTEIN 8 357 IPR030184 GO:0016021|GO:0022857
Amo08g0634 367 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020|GO:0016021
Amo08g0634 367 Pfam EamA-like transporter family 191 331 IPR000620 GO:0016020|GO:0016021
Amo08g0634 367 MobiDBLite consensus disorder prediction 336 367 - -
Amo08g0634 367 PANTHER WAT1-RELATED PROTEIN 8 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0634 Amo-Chr8 11270316 11276078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0634 3 337 Nodulin-like Gene Family AT2G37460 48.955 3.21e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0634 - - gmx:100812537 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0634 08 11270316 11276078 Amo17g1361 17 43028433 43032278 hybridization