Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0633 ATGGGTGCGTGGATGAGAAATGCAAAGCCATATCTGCTTCTTGTGGCGGTGCAATTTGGTTCAGCGGGAATGTTCATATTCGCCATGGATGCAATTGCCAAAGGGATGAGCCATTACGTTTTCATTGTGTACCGTAATGCCATCGCCTCTGTTACTCTCGCTCCCTTTGCTTTTCTTCTTGAAAAGAAGGTTAGGCCAAAGATGACAGTGCGGGTATTTGTAGAGATAATGGCGTTGGCTTTCTTCGAGATTATACTTGATCAATGTTTCGCCCTGCTAGGGATGAAATACACATCGGCATCATTTCTATCAGCAGTGATGAATTCCGCACCTTCCATTACTTTTCTATTGGCGGTCATTCTTCGAATGGAGCGCATGAAGATTAAGGAGGTAGCATGCCAAGCAAAAGTGATTGGAACTGTGGTTACTTTTGGAGGCACCTTAGTTATGGCACTCTACAAAGGCACCGCAGTTACCATTTCAGGGGCAACCAAAGCGGCCCACGGGCCGGAGAATGTGAACAACCCTTCCGGCAGCCACTGGGCAATAGGAACATGTTTTCTTATCATTGGTTGCATCGGCTTCTCTGCCTTTTACATATTGCAGGCCATAACGTTGCGCAAGTACCCAGCAGAGATGTCGCTCGCAACGTGGGTCTGCTTCGCCGGAGCACTTCAGAGCTCACTTGTGGCGGCTTTTGCCGAGCGCCACCGTCCTCATGCATGGGCTCTTGGTTGGGACATCAGACTCTTTGCTCCAGCTTACGCGGGAATAGTAACATCAGGAGTGCAATACTATATACAAGGGATGGTTAGCAAAGCAATGGGTCCAGTAATTGTAACTGCCTTTAATCCATTGCGTATGGTCATTGTTACCGCCTTGGCTTGCATCGTTCTCTCTGAGCAACTCTACCTCGGAAGTGTAATTGGGGCAATAGTGGTGGTTGGAGGACTATATGCAGTGGTGTGGGGAAAATATAAAGAGCAGAAAGCAAAGGAGAACTCTGAACAACAACAACAACTACCTGTCATTGCTCTCACAAATAATGATACTAATAACAAACCCCAATTTTTGGTCATTCAGCCTCATCAACAAATATCAAGCACAGAAAGCCAGACCAAATAA 1125 0.4658 MGAWMRNAKPYLLLVAVQFGSAGMFIFAMDAIAKGMSHYVFIVYRNAIASVTLAPFAFLLEKKVRPKMTVRVFVEIMALAFFEIILDQCFALLGMKYTSASFLSAVMNSAPSITFLLAVILRMERMKIKEVACQAKVIGTVVTFGGTLVMALYKGTAVTISGATKAAHGPENVNNPSGSHWAIGTCFLIIGCIGFSAFYILQAITLRKYPAEMSLATWVCFAGALQSSLVAAFAERHRPHAWALGWDIRLFAPAYAGIVTSGVQYYIQGMVSKAMGPVIVTAFNPLRMVIVTALACIVLSEQLYLGSVIGAIVVVGGLYAVVWGKYKEQKAKENSEQQQQLPVIALTNNDTNNKPQFLVIQPHQQISSTESQTK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0633 374 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Amo08g0633 374 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020|GO:0016021
Amo08g0633 374 PANTHER WAT1-RELATED PROTEIN 7 334 IPR030184 GO:0016021|GO:0022857
Amo08g0633 374 PANTHER WAT1-RELATED PROTEIN 7 334 - -
Amo08g0633 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Amo08g0633 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0633 Amo-Chr8 11224797 11229207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0633 5 371 Nodulin-like Gene Family AT2G37460 42.400 2.06e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0633 - - gmx:102665912 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0633 08 11224797 11229207 Amo17g2739 17 128430571 128434987 hybridization