Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0625 ATGGCATCGGAGCTTCAATTGCCGCCTGGATTTCGATTCCATCCAACAGATGAAGAACTCGTGTTGCACTATCTCTGCCGTAAATGCACTTCACAACCGATTGCTGTTCCGATCATTGCCGAGATCGACCTTTATAAATATGATCCCTGGGACCTTCCTGGTATGGCTTCTTATGGTGAGAAGGAGTGGTATTTTTTTTCACCTAGAGATAGAAAATATCCGAATGGGTCTAGACCGAATCGGGCTGCAGGAACTGGTTACTGGAAGGCAACCGGAGCCGATAAGCCTATTGGACAACCCAAACCAGTTGGGATTAAGAAAGCTTTGGTCTTTTACTCTGGAAAGGCTCCCAAAGGAGATAAGACCAATTGGATTATGCACGAATATCGTCTTGCAGACGTAGATCGTTCTGTTCGCAAAAAGAATAGCCTCAGGCTGGATGACTGGGTGCTGTGTCGCATCTACAATAAGAAAGGATCAATCGAGAAGCAACAACCGAGCAGCGGCGTCAGTACCGTCGTGAACCAGAGGGCCGAATCTTCGGAAGTCGAAGACAAGAAGCCCGATATAGTTCCACGTGGCGGCGGCGGGGGCGTACTTCCACCGCATCCTCCTACGGCTCAGGCTTCGGCAGGCGGCGTGACGACAGATTATATGTACTTCGACAACTCCGATTCAGTTCCGAAGCTTCACACGGACTCGAGTTGCTCGGAGCAGGTGGTGTCGCCGGAGTTTGCGAGCGAGGTTCAGAGCGAGCCAAAGTGGAACGAGTGGGATAAAAACCTCGAAAGTGCGTATAATTACCTCGATGCCACACTCACGAACGGTTTTGGGTTCCCGTTCCAGGGTAACAATCAGATGTCGCCGCTTCAGGATATGTTCATGAACCTTCCGAAACCGTTCTGA 906 0.5022 MASELQLPPGFRFHPTDEELVLHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYSGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGSIEKQQPSSGVSTVVNQRAESSEVEDKKPDIVPRGGGGGVLPPHPPTAQASAGGVTTDYMYFDNSDSVPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWDKNLESAYNYLDATLTNGFGFPFQGNNQMSPLQDMFMNLPKPF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0625 301 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Amo08g0625 301 PANTHER NAC TRANSCRIPTION FACTOR 56 2 279 - -
Amo08g0625 301 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Amo08g0625 301 MobiDBLite consensus disorder prediction 162 178 - -
Amo08g0625 301 MobiDBLite consensus disorder prediction 162 204 - -
Amo08g0625 301 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Amo08g0625 301 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Amo08g0625 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0625 Amo-Chr8 11140583 11142914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0625 1 301 NAC Transcription Factor Family AT1G01720 68.387 1.92e-147 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo08g0625 NAM 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0625 - - gmx:732553 507.679