Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0620 ATGGTTGATTCAACGTCAGATTCTCAGCTGAATCAGAGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGTTTTTGACATGGTGTATTCTGCAACCTCTCTTTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATAACCTTTACCACCCTTGAAGATGCTGAAAAATTTTACAGGAACTACGCCAAGGTTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGTAGAGAGGGAAAATGGAAATCTAAAATATCTCTGACCGAGAAGACGAATCTGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTTGCGGCTGCCGGGGACCGTCATATATGGGTTCCTATCTATCTGGATCACCACTTTTGGGCAGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTTTATCACCTGGAACAGCTCGCTTATTCAGTTCGTCAAACAATACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCGTGTGCAATCAAATCCTCCATTGAAGCTCAGTTTCAAGATATGTACACTCATCAAAAGTTTAGGGAAGTCCAAGCGCAATTCAAAGAAAGGCGAATTGCATCACTAGATTAA 888 0.4234 MVDSTSDSQLNQSEVDYEFESNEVPEFLTWCILQPLFVVDDQFVPKVGITFTTLEDAEKFYRNYAKVAGFSTRVRSTNRKGNEIKNQLITCSREGKWKSKISLTEKTNLTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEAGIRPSKTYQSFVAAAGDRHIWVPIYLDHHFWAGMRSTQRSESMHSFFNKFITWNSSLIQFVKQYDNCLGSREQAERESDAADFHTVIPCAIKSSIEAQFQDMYTHQKFREVQAQFKERRIASLD* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0620 295 PANTHER OS03G0843700 PROTEIN 26 157 - -
Amo08g0620 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 157 IPR031052 GO:0006355
Amo08g0620 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 188 287 IPR031052 GO:0006355
Amo08g0620 295 PANTHER OS03G0843700 PROTEIN 188 287 - -
Amo08g0620 295 Pfam FAR1 DNA-binding domain 59 144 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0620 Amo-Chr8 11057378 11059617 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo08g0620 FAR1 7.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0620 - - adu:110280446 318.161