Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0614 ATGTGTTCACTTGCTTGTGCTTTTTTTTTTGTTGGAGACTATGCAACGGTTTCTTCTCCGAAGTCGTTGGCGTCTGATCCTGACCAGCTGAAGAGTGCTCGAGAAGATATCAAGGAGCTTCTCAGGACAAAGTTCTGCCATCCGATTCTGATTCGTTTGGGATGGCATGATGCTGGTACCTACAATAAGAATATTGAGGAATGGCCACAGAGAGGTGGTGCTAATGGACTCGTGAATGCATTGAAGCTTATTCAGCCAATCAAAGACAAATATGCTCGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACTGCTGTTGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTCTCATCACCTGAACAATGTCCTGAAGAAGGCAGACTTCCAGATGCTGGTCCTCCCTCACCGGCTGATCATTTGCGTCAAGTTTTCTACAGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGAAGGTCCAGACCTGAACGAAGTGGCTGGGGCAAGCCTGAGACTAAATATACAAAAGATGGACCAGGAGCACCTGGAGGACAATCCTGGACAGTACAATGGTTGAAGTTTGATAACTCATACTTCAAGGACATCAAGGAAAAAAAGGATGAAGATTTATTGGTATTGCCAACAGATGCTGTTCTTTTTGAGGATCCATCCTTCAAGGTTTATGCTGAGAAGTATGCTGAGGATCAGGTAGCATTCTTCAACGATTATGCTGAAGCCCATGCCAAGCTAAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGGGCATAGTATTAGATCCTTCTCCAAAGCCACAAGCAGAGAAGTTTGAAGCAGCAAAGTACTCAACTGGAAAGAGAGAGCTATCTGATGCTATGAAGCAGAAGATTCGATCCGAGTATGAGGCAATTGGTGGAAGCCCAGATAAGCCCCTACACTTGTTAAATTTCATAAATTTATAA 1005 0.4408 MCSLACAFFFVGDYATVSSPKSLASDPDQLKSAREDIKELLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGLVNALKLIQPIKDKYARVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSSPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQVAFFNDYAEAHAKLSNLGAKFDPPEGIVLDPSPKPQAEKFEAAKYSTGKRELSDAMKQKIRSEYEAIGGSPDKPLHLLNFINL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0614 334 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 12 286 IPR044831 GO:0004601|GO:0034599
Amo08g0614 334 Pfam Peroxidase 34 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 MobiDBLite consensus disorder prediction 170 197 - -
Amo08g0614 334 Gene3D Peroxidase, domain 2 140 263 - -
Amo08g0614 334 CDD ascorbate_peroxidase 22 273 - -
Amo08g0614 334 PRINTS Plant ascorbate peroxidase signature 26 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Plant ascorbate peroxidase signature 47 62 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Plant ascorbate peroxidase signature 194 218 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Plant ascorbate peroxidase signature 246 270 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 12 286 - -
Amo08g0614 334 SUPERFAMILY Heme-dependent peroxidases 25 271 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 MobiDBLite consensus disorder prediction 125 145 - -
Amo08g0614 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 162 172 IPR019793 -
Amo08g0614 334 PRINTS Haem peroxidase superfamily signature 112 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Haem peroxidase superfamily signature 94 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Haem peroxidase superfamily signature 162 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g0614 334 Gene3D - 33 271 - -
Amo08g0614 334 ProSiteProfiles Plant heme peroxidase family profile. 94 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0614 Amo-Chr8 10969817 10975793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0614 94 271 Peroxidase AT4G17690 33.498 1.08e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0614 K00434 - sind:105155321 568.926