Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g0608 | ATGCTTGGTGTTCGCTGCTGCCATCGTCCCCCTCGTGCTATCGTCGAGCGTCGGTCGTTGACTAGGAGCTCCCCGTCGCTGTCGCCTGGCCGCCAGACATCTGCACGCCCTTTATGGTGGTGCAATGGGATTGAGTTCTTGCTGTTTATATATGGTGGGGCTCCATACCAGACTCAGGAGAGTAAGCTTAGGAGAGGTGTTGATATTGTTGTTGGCACTCCAGGTCGCGTGAAAGATCATATAGAGAGGGAAAATGTTGACCTGAGCCAGCTAAAGTTCCGTGTCCTTGATGAGGCTAATGAGATGCTCAGAATGGGTTTTGTTGAAGAGGTGGAACTAATTCTAGGCAAGGTACAAGATGTTAGCAAAGTTCAGACACTTCTTTTCAGTGCTACTTTGCCAGAATTGGGTTAA | 414 | 0.4928 | MLGVRCCHRPPRAIVERRSLTRSSPSLSPGRQTSARPLWWCNGIEFLLFIYGGAPYQTQESKLRRGVDIVVGTPGRVKDHIERENVDLSQLKFRVLDEANEMLRMGFVEEVELILGKVQDVSKVQTLLFSATLPELG* | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g0608 | 137 | PANTHER | DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 | 48 | 135 | - | - | |
Amo08g0608 | 137 | Gene3D | - | 28 | 136 | IPR027417 | - | |
Amo08g0608 | 137 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 48 | 135 | IPR027417 | - | |
Amo08g0608 | 137 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 48 | 135 | - | - | |
Amo08g0608 | 137 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 24 | 137 | IPR014001 | - | |
Amo08g0608 | 137 | CDD | DEADc | 50 | 135 | - | - | |
Amo08g0608 | 137 | Pfam | DEAD/DEAH box helicase | 47 | 134 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g0608 | Amo-Chr8 | 10900467 | 10901407 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g0608 | 52 | 134 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 43.373 | 5.91e-13 | 62.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g0608 | K16911 | - | cpap:110823148 | 150.984 |