Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0605 ATGCTGATGCCCCCTCAAATCACGAGAAAAAAGGGGTGGAAGAAGTTTCTGTCATTTATAGGGCCTGGTTTTCTCGTCTCTCTCGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCGATACGAGCTGCTGTGGGTGATACTTATCGGATTGATATTTGCTCTTATTATTCAGTCATTAGCTGCAAATCTTGGCGTAAGCACAGGGAAACACCTTTCAGAGATATGCAAAGCGGAGTATCCAAGACTCGTTAGGTACTGCTTATGGTTATTAGCTGAGCTTGCTGTCATAGCCGCAGACATTCCAGAAGTGATTGGAACGGCGTTTGCACTGAACATACTATTCCACATCCCAGTATGGGGAGGAGTTCTAGTGACTGGGTGCAGCACTCTGTTGCTTCTTGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAACGCTGGTATTTGTGATGGCAGCATGTTTCTTTGGAGAAATGAGTTACGTGAAACCACCAGCGTCTGGTGTCATAAAAGGCATGTTTATTCCCAAACTCAGTGGTCAAGGTGCCACTGCCGACGCCATTGCCCTTTTAGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTGGTGCTGTCTAGGAAAGTACCTAATACAGTTCGTGGCATCAATGACGCGTGTAAATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTGATCAACGTTGCAGTTATTTCTGTGTCTGGCACTGTTTGCTCAGCTTCAAATCTTTCTTCGGCAAACACTGATCATTGCACCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCTAGCTCAACGATTTATGCAATAGCACTATTAGCCTCAGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTAGACTTGAAGATGAAAAGATGGCTTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGTGCCGGTCGACTAATCGTCATCGCATCGATGATACTTTCTTTTGAGCTTCCGTTTGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATAATTGTCATCTCATGGATCCTAGGATTGGGAATCATAGGCATCAATGTGTACTACCTCATCACTGCCTTCGTGGTTGGCTAA 1284 0.454 MLMPPQITRKKGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSEICKAEYPRLVRYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWGGVLVTGCSTLLLLGLQRFGVRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFIPKLSGQGATADAIALLGALVMPHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASNLSSANTDHCTDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWLRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVVG* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0605 427 Pfam Natural resistance-associated macrophage protein 37 398 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 198 221 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 308 327 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 123 142 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 148 169 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 95 121 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 368 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PRINTS Natural resistance-associated macrophage protein signature 336 353 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 7 425 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 Hamap Divalent metal cation transporter MntH [mntH]. 7 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0605 427 PANTHER METAL TRANSPORTER NRAT1-RELATED 7 425 - -
Amo08g0605 427 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 14 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0605 Amo-Chr8 10856785 10863210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0605 7 425 Inorganic Solute Cotransporters AT1G15960 66.587 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0605 K21398 - gmx:100787785 722.235