Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0561 ATGGGACCTCCAGGACCACCCACTCAAATTGGTAGTGCTCAGTCTGTGACGCCTTCTCTTTTGAGATCGAATTCTGGAATGTTAGGGGCTCAAGGGGGCCCCATGCCTTCGCAGACTTCTTTCCCTTCTCTTGTGTCGCCACGCACTCAGTTCAACAACATGAACATTCTAGGAAACATGTCTAATGTAACTTCCATGCTGAATCAATCTTTCCCCAACGGAGTTCCAAATCCTGGGATCTCGGGTCCTGGAAGTAGCCAGCGAGGAGTTGTTGATACTGGAGCCGAAACAGATCCGCTGTCAAGTGTTGGCAATGGAATGAGCTTCAGTAATTCCGCATCCTCGTTCGTACAGTCAAATATGGTGAATGCTGGTTCTTCTGTTCAAGGTCAAGGTCAACAATTTTCAAATCCATCTAATAACCAGCTGTTGCCAGATCAGCAGCATTCACAACAGATGGAACCTCAGAATTTCCAACATGGTCAGCAGCCAATGCAGCAGTTCTCTGCTCCTCTGAATACGCAGCAGCAACAGCAGCAGCAGCATTTTCAATCAATGAGAGGAGGGGTAGGTGGTATGGGACCGGTAAAGTTGGAGCCGCAGGTAAGCAATGACCAACTTGGTCAGCAGCAACAGCAGCAAATACAATCGTTGAGGAATCTTGCTCCAGTGAAATTGGAATCACAGCAAATTCAATCAACTCGAACACTAGCCCAAGTGAAAATGGAGCCCCAGCATTCTGATCAACCATTATTTTTGCATCACCAGCAACAACAGCAGCAGCAACAACAACAGCAACAACAACTACAACAGCAGCAGCTCCTCCACATGTCAAGACAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCTTCTGCACCAGCAGAGGCTTTTGCAATTTCAACACCAGCAGCAGCAACAACTCTTGAAAGCAATGCCTCAACAACGGCCTCAACTGCCACAGCAGTTTCAACAGCAGAATATGCCCATAAGGTCTCCTGTGAAACCAGGATATGAACCCGGAATGTGTGCTAGGCGGCTTACACATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAATATTGAGTTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAGTGGTGTCTTTCTATGTATGGAAGTGGCAGACAAACGACTGGAGTTTTCCCTCAGGATGTCTGGCACTGTGAAATATGTAATCGCAAACCTGGTCGTGGGTTCGAAGCAACTGTTGAGGTTCTTCCTAGGCTTTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTGCTTTATGTTGACATGCCCCGTGAATATCATAATTCATCTGGGCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCCCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTAGGCGCCATGAAGAACTCATTCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAGTACCAGGCCTTTACTCAAAATGCTACACCAAATGTGTCGGCTCCAGAGTTGCAAAATAACTGCAATATGTTTGTTGCATCCGCCCGTCAATTGGCTAAAGCTTTGGAAGTTCCATTAGTAAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAGGACTTGATAGATTACAGCAGAGAAACAGGGACTGGACCCATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGATCATCTGGAATTCATAATCAAGGACAACAACATGAAGATAGATTACAGCAGCAACCGGAACAGCAACAGCAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCTGTGCAAGCTGGTGCCATGCAAATCGCTTCCAGCAATGGTATGGTCAGTGTAAATAACACTGCCAACTCTGCATCTGCATCGACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCAATGAATTCTAGACAACAAAGTTCAATGAACAATTCAGGCAGTCCCTATGGAAGCAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCGAGCACTGTTCCACCGGCCCAGCCTAACTCATCACCTTTCCAATCACCTACACCATCTTCCTCCAATATTCCCCCACAAACATCTCACCCCACCACCTTAACGTCTGCCAATCACATAGGCGCAACAAACTCATCGGGTAACATGTCCTTGCAACATCAGCAATCACCTCTCTCTGGTGAGGCAGACCCGAGTGATGCTCAGAGCTCCGTACAGAAAATAATACACGAGATGATGATGTCCTCCCAGATGAATGGCACAGGTGGAATGGTAGGTGTTGGTTCTCTTGGGAATGACGTGAAGAACGTAAATGGTATTCTGCCGGTGAATACCAATACGGGGCTCAATGGTGGCAATGGCATGGTAAGCAATGGTGCGATGAACAGTAATTCCGGCGTTGGGATTGGTAGTTACGGCACAATGGGTATCGGTCAATCCGGTATGCCTAATGGAATGAGAGCTGCTATGGGAAATAATTCTGTCATGAATGGAAGAGGAGGAATGGCCTCAATCGCGAGGGATCAAGCCATGAACCATCAGCAGGATTTGTCAAATCAACTACTTAGCGGTCTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATAA 2769 0.4568 MGPPGPPTQIGSAQSVTPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQFNNMNILGNMSNVTSMLNQSFPNGVPNPGISGPGSSQRGVVDTGAETDPLSSVGNGMSFSNSASSFVQSNMVNAGSSVQGQGQQFSNPSNNQLLPDQQHSQQMEPQNFQHGQQPMQQFSAPLNTQQQQQQQHFQSMRGGVGGMGPVKLEPQVSNDQLGQQQQQQIQSLRNLAPVKLESQQIQSTRTLAQVKMEPQHSDQPLFLHHQQQQQQQQQQQQQLQQQQLLHMSRQSSQAAAAQMNLLHQQRLLQFQHQQQQQLLKAMPQQRPQLPQQFQQQNMPIRSPVKPGYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCLSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNVSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGIHNQGQQHEDRLQQQPEQQQQMVAHNSNGDQNSVQAGAMQIASSNGMVSVNNTANSASASTTTSTIVGLLHQNSMNSRQQSSMNNSGSPYGSSSVQIPSPGSSSTVPPAQPNSSPFQSPTPSSSNIPPQTSHPTTLTSANHIGATNSSGNMSLQHQQSPLSGEADPSDAQSSVQKIIHEMMMSSQMNGTGGMVGVGSLGNDVKNVNGILPVNTNTGLNGGNGMVSNGAMNSNSGVGIGSYGTMGIGQSGMPNGMRAAMGNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLGAVNSFNNLQFDWKPSP* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0561 922 MobiDBLite consensus disorder prediction 604 644 - -
Amo08g0561 922 MobiDBLite consensus disorder prediction 1 46 - -
Amo08g0561 922 PANTHER LIM DOMAIN-BINDING PROTEIN 1 921 IPR029005 -
Amo08g0561 922 MobiDBLite consensus disorder prediction 8 46 - -
Amo08g0561 922 MobiDBLite consensus disorder prediction 68 106 - -
Amo08g0561 922 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 921 - -
Amo08g0561 922 MobiDBLite consensus disorder prediction 125 186 - -
Amo08g0561 922 Coils Coil 255 275 - -
Amo08g0561 922 MobiDBLite consensus disorder prediction 590 644 - -
Amo08g0561 922 MobiDBLite consensus disorder prediction 125 215 - -
Amo08g0561 922 MobiDBLite consensus disorder prediction 688 784 - -
Amo08g0561 922 Pfam LIM-domain binding protein 346 600 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0561 Amo-Chr8 10295659 10303801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0561 1 918 C2H2 Transcription Factor Family AT1G43850 60.819 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0561 - - gmx:100799771 1423.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0561 08 10295659 10303801 Amo17g2615 17 125483514 125489620 hybridization