Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0541 ATGAAGGAAAAGAGGTTAAATAAACTTAAGGAACAGTTCTTTCAACAAAATGGTGGCTTCATCCTACTACAAAAGATTTCAAGACATAGAGGGTCAAAAGAAACAGCTAAACTCTTCACCGTGGAAGAATTAAAGACAGCCACCAACAACTTTGACGAAAGCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATAYAGGATTACTATCAGACAATAGAACCGTAGCAATTAAAAGATCCAAAATCAGTGGCTCAACCCAAATTGAACAATTCATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAACGTGGGGACACTAGGGTATCTTGACCCTGAATACATGCACACTAGCCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTCTTAGCAGAGCTGCTCACGGGAAAGAAGGCGCTCTCTTTCGCCGTGTCGCCGGAGGTTAGAAACCTTGCTATATACGTTGTTTCTTCAATGGAAGAAGGATGTTTAGTTCAGATTGTGGATGAACACATTATAAATGAGGCAAACGTTGAGGATCTTGTGGAATTTGCCAATGTTGCTAAAGAGTGTTTGAGAGTTAAGAGGGAAGAAAGGCCTAGCATGAAAGAAGTTGCAATGCAACTTGAGGGGCTTAGAGGAGTAGTTGGAGAGAAACACCGATTGGAAGAAACTAAAAGCTCGTTGAAAGCATCATCGTCTTCAATCTTGGATGTTGAAAGTTCTAAGTTTATTGATAGCTTAAGTCAGGTTCCTATGTCACTGGCTGGTGGAAGATGA 798 0.4048 MKEKRLNKLKEQFFQQNGGFILLQKISRHRGSKETAKLFTVEELKTATNNFDESKILGKGGQGTVYXGLLSDNRTVAIKRSKISGSTQIEQFINEVVLLSQINHRNVGTLGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTGKKALSFAVSPEVRNLAIYVVSSMEEGCLVQIVDEHIINEANVEDLVEFANVAKECLRVKREERPSMKEVAMQLEGLRGVVGEKHRLEETKSSLKASSSSILDVESSKFIDSLSQVPMSLAGGR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0541 265 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0541 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 107 IPR045274 GO:0007166
Amo08g0541 265 SUPERFAMILY Protein kinase-like (PK-like) 47 232 IPR011009 -
Amo08g0541 265 Gene3D Phosphorylase Kinase; domain 1 25 109 - -
Amo08g0541 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 108 244 - -
Amo08g0541 265 Pfam Protein kinase domain 106 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0541 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 2 107 - -
Amo08g0541 265 Gene3D Transferase(Phosphotransferase) domain 1 110 249 - -
Amo08g0541 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 108 244 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0541 Amo-Chr8 9883969 9886367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0541 108 230 Receptor kinase-like Gene Family AT1G21250 50.407 7.22e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo08g0541 Pkinase 2.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0541 - - ahf:112706010 296.204