Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0528 ATGGTTGCCAAGGCTATTGTGGTGCCTTCAAATTCTACCATTGCTTCTAATGCTGAAACAACTGCTGTTTTGAAGACAGATTTGAATCCTAATCAAAAAGGGAAAAAGGCTAAACGAAAGTCTAAAAAAAGAAAGCAATTGGTTTCTGAAAGTTGTTGTTATGAATCAAAGCGAATAAAACTAACTGAAGGTGCTGCCAATTCAAATAGCTCACACTGCTTGTCATATAACACCTCTTGTTCTGGGAAGGACTTGACTTCACAGAAGAGCGTAGCTTTGGGTTTACAGCAAGCAGAACAATTTGCTGGTTCTGGAAATTCACATAGCTCCCAATGCTTGCCAAATGACACCTCTAATTTTAGTAAGGACTTGATCACAGAGGTGAATGTATCTTTGTTTTCCAAAGATTCTTGCTCAGAATCACAGCTTGTAAAACTATCCGAGTTTGCTGGGATTTCAAATAGTTCAGAGTGCTTGGTAAATGGCACCTCTAATTCTGGGAAGGATTTAAGGGCAAAGAAGAATGTATCTGATTGCTTTTCTCATCTTCATCCGAGTGCAGTCCAAAATCCTAATGGAAAAACTAAGGTGGCACAATCCTCTAAGGGGATTGTAACAGAAGAAGTTGCCAATACAATTTCCGGTAAAGCAACTCCAAGGGTTGTTAAGAAGAAAAAGATTGTTAAAAGAGTGGTCAAAAAGGTTGTGAAACCAAAATCAAGTAGGTCAAGTTCAATATCAGCAAATATGTTTGATGGGATAGTGAAAGAAGATAATGTTCCTGTTAGTTCATTAACTGCTGCTGCTCCTTTGGACAAGATCCCAACGACTTCTTTTGAGGAAAAGACTGCCCCTGTTGACAAGATGTCAGTTCCAGATTATTTCCAGTCTTTACCAAGTGAAGGAAATTTGTTGCTTGAAGACAAAAATGCTGTTGTACACCTTGAAGAAAAGCATACTGAATTATTCAATGGAAATACTTCTGACATTAATCACATTGAGGCTTATAGTAAGCAATCATGCCAACATGAAAAGGAGAACTGTGACATACAATCAGTTCCAAATTCTGATATTTCCATTGATTGTGTTAAAGGGGACACAGGTACTGTTGAAGAGAGAGAGGTTAGAACTCTCTTAAAATTTTCTCCTTCAAAGATGGAGGGCATGTCTCTAGATGCAGAAAATCCAGTTGGTCTTGCAAATGTTGTCTACACAACCTCAGATCTGTTGAAGGTTCCTAGTCTTTCAGAAGCCTTAGATATATCTGTTCCAATGTTAGATTTTGGCTCACAATCCAGAACAGATGGGATCACAACTTTAACTGTGAAAAGGGGGATTTCTGTGGCTGATTTATATGAGGATGCAAACAAGATTTCACCCTTGTACAAAAGGCGCAGAACCACAGCTTGTCACTCTAGTATCACTGAGTGTCCATCTGAACTCAGTGATGTGATTGTGGCTTCCACCACATCTTGTGCAGAAGTCCCTATTCACTTTAGTGATATGCAAATACATAAGGAAGAAGTTGAATTGCTAAGCATGGCTGTTATGTCTACTCCGTTGCTGACTTATACAGAGGATATTGCTAAATTGTCTGACATTAGCTTGGGTAGAGATTCTTTTGAGTCTATGAATTTAAATAGGGAAAGAGATTCTCCCAAGAGTTTGGAATTGCAGCACTCAGGCATTGCCTCTAATTCTCTTCTTGAATACTCAGCCACTCCAAATGTTCATTTTCCAATGTTGGAAGGTGAACCGAAAGAAAATGCCACTTCAGTTGTGCCAATCAGTACGGAGACAAGCATTTTGGCTGTTGAAAATGTTCAGGGAGAAAAAATTAATTTACAGGACGTTGGGGGAAATCATCAGAAGAGAGTTTGTGTGCAAAGATCTCCAGATTGTGTCATTCCTAAAACTTCAAAGGACCAGTCCTCCTTTTTTCCCCGATCAAAGCCATTTACTTCATCCCGTTCATTAAAACCTCGAACCTGGCTTCGAACAGGTAATAATTATCCTGGTTCTTTTTCTGGAAGCAAGCCTTCGTTGATAACTAGTCCTCCTAACAAGTTAATTCCACAAATGAAAGGGAACACTCAAAATACTCTTTATACCCGTAAGGGTAACAGTCTTGTTCGGAAAGTTATCCCTGTTTCTGCTTCAACATCAACATCCGTTGCTAACCAGTCACCATCTTTGGGCTTTGACAACTTTGGAAAGAGCATCAGATCTGAATGCATGGTTAATGTTCCAGGTCAACCAGGTGCTTTGAAAACTGGAGTAAATGATGTTCCTTTGAAGGGTCACATAATACTTCCACTACCCACTGACACCAAATTGGAGAGTGGATCTTCCCCATTTACAGAGAATCTTACACTTGGTTGCTCTGAATTTGCAGCTGATCCTAAGAATGTTGGAGAAACTAATGATGCCGCAAAATCTTATGAGGAATTGTGCAAATATTCTGAAACATACGAAAATCAAATTGGTTCAGACAATCGTGGGGCTGGCCAAGTTGAGATTTCTTCTTCAATTGCAAAGAGAATAGTATATATGAAGCCCAAGTCAAATAAATTAGTTGCATCTTTGGATTCTAGTAATCTCTCTGTCTCTACTGATGGCAAGACTCAAACAGCATACTCCAATGGCTACTACAAGAAGAGCAAAAATCAGATAATAAGGACTTCATTTGTTAGTCATATCAGCCCAACAGTTACAATGCAAGATAGTAATGTAAATTCTGATGGTCCATCGGATTCTAAAGAGATTTGCAGCAGGTTTACAAAGAAGTGGTCGCAAAAAGTTGCTGGGACCTTGTGCAAACCTTTAAAAGCCCCACTTGTTGGGACCCTTTCATCAAAAAACAACACTGGCTCAGGGCATTATCGGAAGATTTTGCCTCACTTTTTTCAATGGAAAAGATCAACATTTCGAAGAAGATTTGTTCACAATCGTGATTTAAGCTCCAATTCTACTCCCTCATCAGCAAACAGCAAGAAATTGCTTCTTTTAAGGAAGAGGGATGCTGTTTACACTAGATCAACCCATGGGTTTTCTCATTGGAAACCTAAGGTATTACATGCTGGTGGATCCATAAAAGGGTCCAAATTTGCTGGCAGGCACTCTGAGAAGGTTAATGAGGAAGCACTTGCTGTTGCTGTGTTGGAGAGGAAAACAAGAGAACAGAAAGATGTTGCTTGTAACAGTTCTCAGGCAAAAGGCTTGGCTGCCAAAGAAGGTTCCATCCAACGAAGATTAGTGATTGGGGAAAATGTGTATTTCCAAATTGGCAAAGGTAATCAGCTTATTAGGGACCCAAAGAATCGGACTCGGATTTTGGCTAATGAAAAAGTTAGATGGAGTCTGCACACTGCTAGACAGCGCCTTGCACGAAAGCAGAAGTACTGTCAGTTTTTTACCAGATTTGGGAAATGTAACAAGGATGATGGGAAGTGTCCTTATATTCATGATCCCTCAAAAGTTGTTGTCTGCACTAAGTTTCTAAATGGTTTATGTTCTAATGGCAACTGCAAATTGACTCATAAGGTTATTCCGGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAGTTGTCCTTACAGACATGTCAATGTGAATCCTAAGGCTTCTATTTGTGGAGAATTTCTCAGGGGCTATTGTGCCGATGGAAATGAGTGTCGGAAGAAGCATAGCTATGTCTGTCCAACCTTCGAAGCAATGGGAAACTGCGAAGAAGGAACCAAATGCAAGCTTCATCACCCGAAGAAACTGAGTAAGGAAAAGAAAAGGAAGAGGTCCAGAGATGAGAATGTTGGTAGACGGCGTTACTTTGGTTCCGTTCTCACTGATATCAAAGAAACTGGGTTAATGGTGGCTCAAAGGCAATGGCAACAGAGTCATGACAAAGACGGAGATGTTGCTGACTATATCGGCTTCGAAGTTGAAGAAAGTGTTGATCAACCATATGAACAGGCAACACCATGTAACAATGATATTTGGGACTTGCAATTGGACAATCTTGATGAACCTATTAGACCTGTTCTTACGTTGAAAAACATTTTTATGGCTCAATCATCTTCAGTCTAG 4101 0.3975 MVAKAIVVPSNSTIASNAETTAVLKTDLNPNQKGKKAKRKSKKRKQLVSESCCYESKRIKLTEGAANSNSSHCLSYNTSCSGKDLTSQKSVALGLQQAEQFAGSGNSHSSQCLPNDTSNFSKDLITEVNVSLFSKDSCSESQLVKLSEFAGISNSSECLVNGTSNSGKDLRAKKNVSDCFSHLHPSAVQNPNGKTKVAQSSKGIVTEEVANTISGKATPRVVKKKKIVKRVVKKVVKPKSSRSSSISANMFDGIVKEDNVPVSSLTAAAPLDKIPTTSFEEKTAPVDKMSVPDYFQSLPSEGNLLLEDKNAVVHLEEKHTELFNGNTSDINHIEAYSKQSCQHEKENCDIQSVPNSDISIDCVKGDTGTVEEREVRTLLKFSPSKMEGMSLDAENPVGLANVVYTTSDLLKVPSLSEALDISVPMLDFGSQSRTDGITTLTVKRGISVADLYEDANKISPLYKRRRTTACHSSITECPSELSDVIVASTTSCAEVPIHFSDMQIHKEEVELLSMAVMSTPLLTYTEDIAKLSDISLGRDSFESMNLNRERDSPKSLELQHSGIASNSLLEYSATPNVHFPMLEGEPKENATSVVPISTETSILAVENVQGEKINLQDVGGNHQKRVCVQRSPDCVIPKTSKDQSSFFPRSKPFTSSRSLKPRTWLRTGNNYPGSFSGSKPSLITSPPNKLIPQMKGNTQNTLYTRKGNSLVRKVIPVSASTSTSVANQSPSLGFDNFGKSIRSECMVNVPGQPGALKTGVNDVPLKGHIILPLPTDTKLESGSSPFTENLTLGCSEFAADPKNVGETNDAAKSYEELCKYSETYENQIGSDNRGAGQVEISSSIAKRIVYMKPKSNKLVASLDSSNLSVSTDGKTQTAYSNGYYKKSKNQIIRTSFVSHISPTVTMQDSNVNSDGPSDSKEICSRFTKKWSQKVAGTLCKPLKAPLVGTLSSKNNTGSGHYRKILPHFFQWKRSTFRRRFVHNRDLSSNSTPSSANSKKLLLLRKRDAVYTRSTHGFSHWKPKVLHAGGSIKGSKFAGRHSEKVNEEALAVAVLERKTREQKDVACNSSQAKGLAAKEGSIQRRLVIGENVYFQIGKGNQLIRDPKNRTRILANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDDGKCPYIHDPSKVVVCTKFLNGLCSNGNCKLTHKVIPERMPDCSYFLQGLCTNRSCPYRHVNVNPKASICGEFLRGYCADGNECRKKHSYVCPTFEAMGNCEEGTKCKLHHPKKLSKEKKRKRSRDENVGRRRYFGSVLTDIKETGLMVAQRQWQQSHDKDGDVADYIGFEVEESVDQPYEQATPCNNDIWDLQLDNLDEPIRPVLTLKNIFMAQSSSV* 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0528 1366 Gene3D - 1156 1210 - -
Amo08g0528 1366 SMART c3hfinal6 1184 1209 IPR000571 GO:0046872
Amo08g0528 1366 SMART c3hfinal6 1129 1157 IPR000571 GO:0046872
Amo08g0528 1366 SMART c3hfinal6 1211 1237 IPR000571 GO:0046872
Amo08g0528 1366 SMART c3hfinal6 1158 1182 IPR000571 GO:0046872
Amo08g0528 1366 SMART c3hfinal6 1238 1260 IPR000571 GO:0046872
Amo08g0528 1366 ProSiteProfiles Zinc finger C3H1-type profile. 1129 1158 IPR000571 GO:0046872
Amo08g0528 1366 Gene3D - 1211 1274 - -
Amo08g0528 1366 ProSiteProfiles Zinc finger C3H1-type profile. 1184 1210 IPR000571 GO:0046872
Amo08g0528 1366 ProSiteProfiles Zinc finger C3H1-type profile. 1211 1238 IPR000571 GO:0046872
Amo08g0528 1366 PANTHER CCCH ZINGC FINGER 2 1355 - -
Amo08g0528 1366 MobiDBLite consensus disorder prediction 639 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0528 Amo-Chr8 9631761 9638674 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo08g0528 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0528 - - ahf:114924304 2608.94