Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0505 ATGATTCTTAAGATACTTGGAATTATCCAATTTGAAAATATTTTCAAAACTAAACTTCAAATTTGTATGATTTATCCGACTATTGAAGATTTTCTTCAAAGTGACAATAGTATTATGCTTATTAGATATTCCTACAAGGATATCAAGAACATAACAGGCGTGTTCAAGACAAAACTGGGAAACGGAGGCTACGGTTCTGTCTTTCACGGAAAACTTCGAAGTGGCCGCTTTGTAGCCGTTAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAGCTCTACACCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAAAACTTCAACCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTGTCTCCCATTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGAATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATCTGAATGCACACACTGAAAATTCCAGCCAAATATATTTTCCCTTCTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAGGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTGTGATGACGTCTGTTCAGTCAGTGATTCAAAGGAATAG 1119 0.3807 MILKILGIIQFENIFKTKLQICMIYPTIEDFLQSDNSIMLIRYSYKDIKNITGVFKTKLGNGGYGSVFHGKLRSGRFVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPIDKSIVSMTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAHTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENVEDTTTHNSSKLSCDDVCSVSDSKE* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0505 372 ProSiteProfiles Protein kinase domain profile. 53 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0505 372 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 13 336 - -
Amo08g0505 372 SMART serkin_6 53 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0505 372 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 336 IPR045874 GO:0004672
Amo08g0505 372 MobiDBLite consensus disorder prediction 329 372 - -
Amo08g0505 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Amo08g0505 372 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Amo08g0505 372 SUPERFAMILY Protein kinase-like (PK-like) 34 324 IPR011009 -
Amo08g0505 372 Gene3D Phosphorylase Kinase; domain 1 29 127 - -
Amo08g0505 372 Pfam Protein kinase domain 56 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0505 372 Gene3D Transferase(Phosphotransferase) domain 1 128 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0505 Amo-Chr8 9270754 9273585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0505 39 351 Receptor kinase-like Gene Family AT5G38280 50.784 1.85e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo08g0505 Pkinase 5.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0505 - - ahf:112704953 697.967