Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0498 ATGATGGAGTGCAACAGGGATGAGGCAATTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGTTGGTGCAAAGAAGTTGGCTCTCAAGGCTCTAAATCTCTATCCGGCATTGGAGGATCTTCCCCAGTTTTTGCAAACAATTGAAATTTTTATCTCTGCTGAGAATAAAATTAGTGGAGAAATGGATTGGTATGGTATACTTGGTGTGAGCCCTTTTGCCGACGAAGAGACTGTTAGAAAGCAATACAGGAAGCTGGCTCTCTCTCTCCACCCCGACAAAAACAAGTGTTTAGGTGCAGAGGGTGCATTCAAGCTGGTTTCCGAGGCATGGAGTTTGCTATCAGACAAGACCAAGAGACTAGAATATAACCAAAAGAGGAGTTCAAAAGGTTTTCAACATAACACTTCAAACCATGTTGCATCTCAATCAGATACACCTAGTTCAAATGGTTATTATAATTTCAAGAAGGATAACACGAAAGCTGGAAATAGTAACTCTCGGAGATCTTCATCTTCAGTTCCACCTACCCACAGAAGAGCTGAAACCTTTTGGACTATCTGCAATCGATGCAGGACACATTATGAATATCTGAGGATTTATTTGAATCATACCCTTTTGTGTCCCAATTGCAATGAAGCTTTTGTAGCTGTGGAGAGGGGTCCACCTCCCAATGTCTTTAAGTCACCAAATTGGTCTTCTCGACAACATCCTCAGGGTTCTCGACATCAATCTGGAAGTAATAACTCGAACTATCAGTGGAGTTCTCAATCGAGAATGGCTGGTTTTGGTAGCACAGATGGATCATCTTCCGTTGCTGCACAAGCTGCTAGTGTTGTGCAACAGGCAAGTGAGAAGGTGAGAAGAGACGGAGCACCATCAATTGCTGAATGGGAGAGGAGTCAACAGTCTAAGAGGAATGATGGTTCTTATTATAATTCAAAGAAGAGGAAGACTGATGATTTTCATGTTAATGGTTATCAAGGATACACGGCAAATCAAGGTCAGGTAAACTTGGAATCCGAAAGGCATTATGGTTTTTCAGGTATGACTGGCGGCAAGCCTTACAGCACAAGAGAATTGTCGATGTATGAATTAAGAAACATGTTGATGGATAAGTCACGGACTGAAATCCGTAAGAAACTACAAGAATGGAAATCAATAGCCGAAGCTAAGATTGCCAATAAGAGACAGAAAAGCCCAGTTACTGGCAAAACCAATGGTAATGGTAATAGGCATGTTGAAGTTGGTTCTTTCAAAGACCCATCTGATGATACAGTTAAGAACGCAGTCTATGTTACAATCAATGTTCCGGACCCTGATTTTCACAACTTTGACTTGGATAGAGCTGAAAATTCTTTTGACGAGGACCAGGTTTGGGCTGCGTATGATGACGATGATGGAATGCCTCGATATTATGCCAAGATTCACAAGGTGATCTCTACAAAGCCATTCAGAATGCGGATCAGTTGGCTTAACTCTCGTAGCAACAGTGAATTGGGCCCCATGGACTGGGTAGGGTCTGGTTTCTACAAAACTCTTGGGGATTTCAGAACCGGCAAGCATGAAATAACCGAATCGCTGAACTCATTCTCACACCAGGTTAAGTGGAGCAAAGGGAACAGAGGAGTTGTCCGAATCTTTCCTGGAAAAGGCGAAGTCTGGGCTCTTTATAGAAACTGGTCTCATGATTGGAATGAACACACCCCGGATGATGTGATACACAAGTATGATATGGTGGAGGTGCTCGAAGATTTCACCGAGGAGCAAGGCGTCATAGTTACCCCCCTTGTCAAGGTTTCTGGTTTCAGGACCGTGTTTAAGAGGCACCCAGACGCCAATCAGCAAAAGAGGATTCCCAAAGAGGAGTTGTTTCGATTCTCACATCAGGTTCCTAACTACTTGCTCACCGGCCAAGAAGCTGACAACGCCCCAAAGGATTGTCGAGAGTTGGATCCAGCTGCCACTCCATTAGACCTTCTTCAGATAGTATCTGGTGATGCCAACAGAGCATCACTAGATAACAATGCTTAG 2046 0.4335 MMECNRDEAIRAKEIAERKFSEREYVGAKKLALKALNLYPALEDLPQFLQTIEIFISAENKISGEMDWYGILGVSPFADEETVRKQYRKLALSLHPDKNKCLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSSKGFQHNTSNHVASQSDTPSSNGYYNFKKDNTKAGNSNSRRSSSSVPPTHRRAETFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKSPNWSSRQHPQGSRHQSGSNNSNYQWSSQSRMAGFGSTDGSSSVAAQAASVVQQASEKVRRDGAPSIAEWERSQQSKRNDGSYYNSKKRKTDDFHVNGYQGYTANQGQVNLESERHYGFSGMTGGKPYSTRELSMYELRNMLMDKSRTEIRKKLQEWKSIAEAKIANKRQKSPVTGKTNGNGNRHVEVGSFKDPSDDTVKNAVYVTINVPDPDFHNFDLDRAENSFDEDQVWAAYDDDDGMPRYYAKIHKVISTKPFRMRISWLNSRSNSELGPMDWVGSGFYKTLGDFRTGKHEITESLNSFSHQVKWSKGNRGVVRIFPGKGEVWALYRNWSHDWNEHTPDDVIHKYDMVEVLEDFTEEQGVIVTPLVKVSGFRTVFKRHPDANQQKRIPKEELFRFSHQVPNYLLTGQEADNAPKDCRELDPAATPLDLLQIVSGDANRASLDNNA* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0498 681 PANTHER HEAT SHOCK PROTEIN-LIKE 2 670 - -
Amo08g0498 681 MobiDBLite consensus disorder prediction 129 180 - -
Amo08g0498 681 Gene3D DnaJ domain 64 176 IPR036869 -
Amo08g0498 681 MobiDBLite consensus disorder prediction 403 417 - -
Amo08g0498 681 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Amo08g0498 681 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Amo08g0498 681 MobiDBLite consensus disorder prediction 132 180 - -
Amo08g0498 681 CDD DnaJ 67 120 IPR001623 -
Amo08g0498 681 Pfam Domain of unknown function (DUF3444) 438 644 IPR024593 -
Amo08g0498 681 PANTHER BNAC03G44070D PROTEIN 2 670 - -
Amo08g0498 681 MobiDBLite consensus disorder prediction 231 272 - -
Amo08g0498 681 MobiDBLite consensus disorder prediction 400 425 - -
Amo08g0498 681 SMART dnaj_3 66 123 IPR001623 -
Amo08g0498 681 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Amo08g0498 681 PRINTS DnaJ domain signature 69 87 IPR001623 -
Amo08g0498 681 PRINTS DnaJ domain signature 87 102 IPR001623 -
Amo08g0498 681 PRINTS DnaJ domain signature 103 123 IPR001623 -
Amo08g0498 681 MobiDBLite consensus disorder prediction 288 321 - -
Amo08g0498 681 MobiDBLite consensus disorder prediction 230 272 - -
Amo08g0498 681 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0498 Amo-Chr8 9201340 9205982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0498 5 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.169 1.12e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0498 - - gmx:100818585 1044.65