Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0494 AAATTTCCTATTGCTGTGAAAATGCTGAATAATTCCCAGGGGAATGGGGAGGAGTTGGTCAATGAAGTTGGTATAATTGGTAGAATCCCCCATGTCAATATTGTCCGGTTGATTGGTTTCTGTGCTGATGGGTTCAGAAGAGCTCTTGTCTATGAGTTCTTGCCAAATTCTTCACTCCAGAAGTTCATAAATTCGCCCGACAACAAGCAAAACTTTTTGGGCTGGAAGAAGTTGCAAGAGATTGCTCTAGATGTAGCTAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAACGCATTCTCCATTTTGATATCAAACCTCAAAATGTGTTGCTAGATCACAACTTTACTCCAAAAATTTGTGATTTCGGTCTAGCTAAATTATGTTCCAAGGATCAAAGTGTAATGTCAATGACAGCAGCTAGAGGAACTTTGGGGTACATTGCGCCCGAAGTTTTCTCAAGAAACTTTGGAAATGTATCTTACAAGTATGATGTTTACAGTTATGGAATGATGCTGCTAGAAACAATTGGAGGGAAGAAGATCACAGAGGATATAGAAGAAAACAGTAGCCATGTTTACTATCCAGAATGGATGCATAGTATTTTAGAAGAGACTGATGAAATCAGAATTCATATTGAAGATGAAGAAGATGCTAAAATTGCTAAGAAACTAGCAACAGTGGGACTTTGGTGCATCCAATGGCATGCAGTGGATCGACCATCAATGCAGACAGTGCTTCAAATGTTGGAGGGAGACCAAGACACATTAGCAATACCTCCTAATCCTTTTGCTTCCACAGGGCCTTCAAGAAAATATGCTAAAATTAGTGTGCCTGCAAGACAAATTACCCAAGATTTAGAAGTGATCCAAGAGTTAGATTAA 885 0.391 KFPIAVKMLNNSQGNGEELVNEVGIIGRIPHVNIVRLIGFCADGFRRALVYEFLPNSSLQKFINSPDNKQNFLGWKKLQEIALDVAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFTPKICDFGLAKLCSKDQSVMSMTAARGTLGYIAPEVFSRNFGNVSYKYDVYSYGMMLLETIGGKKITEDIEENSSHVYYPEWMHSILEETDEIRIHIEDEEDAKIAKKLATVGLWCIQWHAVDRPSMQTVLQMLEGDQDTLAIPPNPFASTGPSRKYAKISVPARQITQDLEVIQELD* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0494 294 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Amo08g0494 294 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0494 294 SMART serkin_6 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0494 294 SUPERFAMILY Protein kinase-like (PK-like) 3 251 IPR011009 -
Amo08g0494 294 PANTHER RECEPTOR-LIKE KINASE 3 293 - -
Amo08g0494 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Amo08g0494 294 PIRSF ILK 1 259 - -
Amo08g0494 294 Gene3D Transferase(Phosphotransferase) domain 1 55 258 - -
Amo08g0494 294 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 293 IPR045874 GO:0004672
Amo08g0494 294 Pfam Protein kinase domain 4 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0494 Amo-Chr8 9158683 9159567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0494 4 289 Receptor kinase-like Gene Family AT1G66910 50.859 5.51e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo08g0494 Pkinase 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0494 - - ahf:112764583 588.571