Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g0493 | ATGTTAAACCTTTGTACATTTTTTATACACCTTCTACCGCTGCTGTGGATCTCCTTACAAGTTTTCGATTTTTATGCCACCCGGTGGAATACCAAGGTGGCAAAGGATTCAGACAAAACAATGTGTTCATCTGAATGGTGTGGGAGGCATGACATAAGGCATCCTTTCAGGCTGAATAATAGTAGTCCAAGCTATTGTGGTGACCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAATCAATTAACTACAACAACTACACAATTCGACTAGTAGATGCCAATGTTGCCCTGCATAGCCATGATCACTCATACCTCCTTCCTTATTCTTTAACCTCCTCCAACTTCACCAGTGCCCAAGATGAACCATATGATGATTGGTTCTATAAACAGCATCATTTAGTTGATGTTATTAGATTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAGAATCTTCTTCTGCTGTTGCAACTTGCATGAATGGATCCTATGCGCTTGGGAGTACATTCTATGTAAGTGATATTGATAAAACTCTCCAGGATTTGGCGGTCAGAGACTCGTGTCATATAGAGTGCATATATCTGACTTCATGGCCTGCTGAAATCAAACACAGAAATAATTCATGCACAGACATCCATCATATGCTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGTATATTGCAAGTTTAAGGCCATGCTCACTGATCATAACAAAGTCATTTGTTATAAGCCTTCACTTATACCTAAAAGTTTCCTAGACTCAATGTATGTTGAGGTTCTAATGGCTGGAACGGTTTTATTTGCTCTTGCCAAATTTGCACTTGGAGCTCCAAGCATCATTATCTTCTGCATATATAAATGGAGACGGAGGCATTTATCCATATATGATAGTATCGAAGATTTTCTGCGAAGTGACAATAACATTATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCGAATCCAATGGCCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTGCTCTCATATACGAGTTGATGGAAAATGGATCACTAGAAAAATACATATTTTCCCCTCAAGACAAGGCTTCCTTAAGTTGTAAAGAGCTCCACTCCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAGAACTTTAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCGGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGCAGAAGGAAGAATTTGAATACACAGACTGAAAATTCGAGCCAAATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGATTCAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGCGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAAGAGAATGGTGAAGATAATACAACTCAAAACAGTTCAAAATTATCCTCTGATGACGTCTCTTCAGTCAGTGATTCAAAGGAATAG | 1989 | 0.3967 | MLNLCTFFIHLLPLLWISLQVFDFYATRWNTKVAKDSDKTMCSSEWCGRHDIRHPFRLNNSSPSYCGDHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDANVALHSHDHSYLLPYSLTSSNFTSAQDEPYDDWFYKQHHLVDVIRLTKQMVYLMRCPPYGVESSSAVATCMNGSYALGSTFYVSDIDKTLQDLAVRDSCHIECIYLTSWPAEIKHRNNSCTDIHHMLLYGFELSWLKVYCKFKAMLTDHNKVICYKPSLIPKSFLDSMYVEVLMAGTVLFALAKFALGAPSIIIFCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAESNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQDKASLSCKELHSISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNTQTENSSQIYFPFWVYDELQDGREITIENDSDEEMKLAKRMMIAALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENGEDNTTQNSSKLSSDDVSSVSDSKE* | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g0493 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 463 | 475 | IPR008271 | GO:0004672|GO:0006468 | |
Amo08g0493 | 662 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 6 | 250 | - | - | |
Amo08g0493 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 324 | 614 | IPR011009 | - | |
Amo08g0493 | 662 | Pfam | Wall-associated receptor kinase galacturonan-binding | 42 | 106 | IPR025287 | GO:0030247 | |
Amo08g0493 | 662 | MobiDBLite | consensus disorder prediction | 636 | 654 | - | - | |
Amo08g0493 | 662 | MobiDBLite | consensus disorder prediction | 614 | 662 | - | - | |
Amo08g0493 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 625 | - | - | |
Amo08g0493 | 662 | Pfam | Protein kinase domain | 346 | 611 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g0493 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 349 | 371 | IPR017441 | GO:0005524 | |
Amo08g0493 | 662 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 285 | 639 | - | - | |
Amo08g0493 | 662 | ProSiteProfiles | Protein kinase domain profile. | 343 | 627 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g0493 | 662 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 285 | 639 | IPR045874 | GO:0004672 | |
Amo08g0493 | 662 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 6 | 250 | IPR045874 | GO:0004672 | |
Amo08g0493 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 322 | 417 | - | - | |
Amo08g0493 | 662 | SMART | serkin_6 | 343 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g0493 | Amo-Chr8 | 9147380 | 9151365 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g0493 | 36 | 625 | Receptor kinase-like Gene Family | AT5G38260 | 35.737 | 9.77e-104 | 327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Amo08g0493 | Pkinase | 6e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g0493 | - | - | aip:107607706 | 1328.15 |