Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0491 ATGAAACCTGTCATGGTGGTGTGGGTGTGGGTGTTGGCCTTACTCCTATCTTGTGGAAACGGTTACAGCAGAGTAACGGATTCTGTTACGTGTTCCAGTCAGTGGTGCGGAACGCATAACATAAGCTATCCATTCACACTAACTAACACTCCACCTAACTGCGGTGATCCCACCTTCAACAACACGCTCTCTTGCGACAATCATAACCAACTCTTTCTTTACTTCAAATCACGAAAATTCTATGTTCAGTCTATTAATTACAACAACTCCACACTCCGATTAGTAGATTCCACCATTATTAACAACTCTTCTTATTTTCTGGCCTCCTATAATTTCAACTCTTACAAATCATATCAACACCATCACAAGCAGATTCTATACGTGACGTGTCCAAACGCGGTGAGATCCGAAGTTGATGACCCTCCTGCTGCAACTTGCATCAACGGTTCTTATGCGCGTGGAAGTAGCAGCTTCCATGTCTATGATGGTAACAAGACTTTGCAAGAGTTGGGACTGCAAGACACGTGTCGCGTAGAGTGGATGTATCCAAGTTCGTGGCCGGGTGAAATCGACGGTGGAAACATCTCTTGCGTAGATATCCGTACAATGCTGCTTTACGGGTTTGAAATTCCCTGGGGCTTGTGTTTTTGCCAACATGCTGTCTTCGATGATCAAAATAACAACCTTCGTTGTTTAAGTCAACACTCACCCACTCCTTTAGTGGAAGTCATTGGAGAATGGATATACTATATAATATTGTTCTTGGTTGGCAAATTCATGCTTGGAATTGCATTTGTCATTTTCTGCGAATGGCGACAGAAGAATTTAGGCACGTATTACACCATTGAAGATTTTCTGCGAAATAACAATGAAATCTTGCCATTTAGATACTCTTACAAAGACATCAAGAACATAACCAAAGGATTCAAAACAAAACTGGGAAATGGAGGCTATGGCTCTGTCTTTCAAGGAAAACTTCCAAGTGGTCGTCTTGTAGCTGTCAAAGTGTTGAATAACACTAAGACCAGATCTAATGAAGAAGAATTTATCAGTGAAGTTGCTACTATTGGTAGAATTTACCATGTCAATGTAGTGCAACTCATTGGTTTCTGTGTGGAAGGACTAACACGTGCTCTTATATATGAGTTAATGGAAAATGGGTCTCTAGAAAAGTACATATTTTCACATGAAAAAGGTGTTTTCTTAACTTGTGAAAAATTGTACAAAATTTCCCTTGGGGTGGCACGTGGCATCGAGTTCATGCATAATGGTTGTGACATGAAGATTCTGCATTTTGATATCAAGCCTCAAAACATTCTTCTTGATGAGAATTTCAATCCGAAAGTCTCTGATTTTGGACTTGCAAAGCTATGTCCCACTAGTGATAGCAAAGTGTCTTTGACTGCAGCAAGAGGAACTATAGGATACATGGCTCCTGAGCTATTCTACAGAAACATTGGAACAATTTCCGATAAAGCTGATGTCTATAGTTTTGGAATGTTGTTAATGGAGATGGCAAGTAGGAAAAAGAATCTAAATACATCGGCTAAAAATTCTAGCCAAATTTATTTCCCTTTCTGGGTTTATAATCAGTTACATGATGGAAGTGAAATTGTAATTGAAAATGACACAGATGAGGAGATGAAGTTGGCCAAAAAGATGATGATTGTGGCATTATGGTGTATACAAACAAAGCCTAGTGATCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGATGAAGAATTGGAAATATCTCCTAAGCCTTACATATATTCACATGATATACCTGCACAAGATGTTGGAGATTTTAGCACTTCAATGCTATTCTCTGATGTATCATCAGTTAGTAATTCTAAAAAAATTGTGTATTCCCCTTAG 1890 0.3915 MKPVMVVWVWVLALLLSCGNGYSRVTDSVTCSSQWCGTHNISYPFTLTNTPPNCGDPTFNNTLSCDNHNQLFLYFKSRKFYVQSINYNNSTLRLVDSTIINNSSYFLASYNFNSYKSYQHHHKQILYVTCPNAVRSEVDDPPAATCINGSYARGSSSFHVYDGNKTLQELGLQDTCRVEWMYPSSWPGEIDGGNISCVDIRTMLLYGFEIPWGLCFCQHAVFDDQNNNLRCLSQHSPTPLVEVIGEWIYYIILFLVGKFMLGIAFVIFCEWRQKNLGTYYTIEDFLRNNNEILPFRYSYKDIKNITKGFKTKLGNGGYGSVFQGKLPSGRLVAVKVLNNTKTRSNEEEFISEVATIGRIYHVNVVQLIGFCVEGLTRALIYELMENGSLEKYIFSHEKGVFLTCEKLYKISLGVARGIEFMHNGCDMKILHFDIKPQNILLDENFNPKVSDFGLAKLCPTSDSKVSLTAARGTIGYMAPELFYRNIGTISDKADVYSFGMLLMEMASRKKNLNTSAKNSSQIYFPFWVYNQLHDGSEIVIENDTDEEMKLAKKMMIVALWCIQTKPSDRPSMKRVVEMLEQDDEELEISPKPYIYSHDIPAQDVGDFSTSMLFSDVSSVSNSKKIVYSP* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0491 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Amo08g0491 629 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Amo08g0491 629 Pfam Wall-associated receptor kinase galacturonan-binding 31 96 IPR025287 GO:0030247
Amo08g0491 629 Gene3D Phosphorylase Kinase; domain 1 287 383 - -
Amo08g0491 629 CDD STKc_IRAK 313 581 - -
Amo08g0491 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 220 IPR045874 GO:0004672
Amo08g0491 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 251 605 IPR045874 GO:0004672
Amo08g0491 629 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Amo08g0491 629 Pfam Protein kinase domain 310 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0491 629 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0491 629 SUPERFAMILY Protein kinase-like (PK-like) 290 580 IPR011009 -
Amo08g0491 629 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 6 220 - -
Amo08g0491 629 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 251 605 - -
Amo08g0491 629 Gene3D Transferase(Phosphotransferase) domain 1 384 592 - -
Amo08g0491 629 ProSiteProfiles Protein kinase domain profile. 307 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0491 Amo-Chr8 9126382 9129024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0491 9 608 Receptor kinase-like Gene Family AT5G38260 37.161 1.01e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo08g0491 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0491 - - aip:107605930 724.931