Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0490 ATGTTATATTTGAAGTGCCCACCATATGGAGTAAAATCTTCTTCTGCTGCTGCAACCTGCATGAATGGATCTTATGCGCTTGGGAGTACATTCTATGTCAGTGATATTGACAAACCTCTCCAGGATTTGGCATTCGGAGACTTGTGTCAGGTAGAGTGGATGTATCTGACTTCATGGCCTACTGAAATCAAACACACAAATATTTCATGCGCAGACAACCATCATATGTTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGCATATTGCAAGAATGATGATCCAGGATATGCCATGCTCAGTGATCATAAAGTCATTTGTTATAAGCCTCCACTTATGCCGAAAATTTTCCTAGTTCCACTGATTGTTGGGTGTCTGGTGTATGGAACGATTTTATTTTTTCTTGGCAAATTTGGACTTGGAGTTCTATTCATCGTTATTTTCTGCATATGTAAATGGAGACGAAGACATTTATCCATATACGATAGTATTGAAGATTTTCTGCGAAGTGACAACAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTGGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCAAATCCAATGGCCAGGAGTTCATAAATGAAGTTGCTACTATTGGAAGAATTCATCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCCTTAGAAAAATACATATTTTCACCTCAAGAGAGTGCTTCAAATTCCTTAAGTTGTGAAAAACTGTACAATATTTCTCTTGGAGTGGCACGTGGTATTGAGTATCTGCATAATGGTTGTGACATTAAAATTTTGCACTTTGACATTAAGCCTCATAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTTTATCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCAGATGTTTATAGCTTTGGGATGTTGTTGATGGAAATGGCTAGTAGAAGGAAGAATTTGAATGCTTTGACTGAAAATTCCAGCCAAATTTATTTTCCTTTCTGGGTTTATGATCAATTACAAGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAGAAAATGATGATTGTGGCATTGTGGTGTATACAAACAAAGCCTACTGATCGTCCTTCGATGAAGAGAGTTCCTTACTTCTATCCACTTGATGAACCTGAAGGCGAAGTTGGAAAAGATAGCAGTTCAAGGGTATCCTCTGATATGTCATCAGTTAGTGGTTCCAAAGAATAG 1473 0.3863 MLYLKCPPYGVKSSSAAATCMNGSYALGSTFYVSDIDKPLQDLAFGDLCQVEWMYLTSWPTEIKHTNISCADNHHMLLYGFELSWLKAYCKNDDPGYAMLSDHKVICYKPPLMPKIFLVPLIVGCLVYGTILFFLGKFGLGVLFIVIFCICKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQESASNSLSCEKLYNISLGVARGIEYLHNGCDIKILHFDIKPHNILLDENFNPKVSDFGLARLYPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNALTENSSQIYFPFWVYDQLQDGREITIENDTDEEMKLAKKMMIVALWCIQTKPTDRPSMKRVPYFYPLDEPEGEVGKDSSSRVSSDMSSVSGSKE* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0490 490 Pfam Protein kinase domain 192 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0490 490 Gene3D Phosphorylase Kinase; domain 1 168 263 - -
Amo08g0490 490 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 123 457 - -
Amo08g0490 490 Gene3D Transferase(Phosphotransferase) domain 1 264 460 - -
Amo08g0490 490 PANTHER RUST RESISTANCE KINASE LR10-RELATED 123 457 IPR045874 GO:0004672
Amo08g0490 490 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0490 490 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Amo08g0490 490 ProSiteProfiles Protein kinase domain profile. 189 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0490 490 MobiDBLite consensus disorder prediction 462 490 - -
Amo08g0490 490 MobiDBLite consensus disorder prediction 475 490 - -
Amo08g0490 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Amo08g0490 490 SUPERFAMILY Protein kinase-like (PK-like) 170 457 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0490 Amo-Chr8 9121582 9125785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0490 136 457 Receptor kinase-like Gene Family AT4G18250 46.061 2.30e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo08g0490 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0490 - - aip:107607706 784.252