Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0489 ATGTTATCCCTTTGTTCATTTTTGGTACCCCTTCTACTGCTGCTGGGGATCTCCTCATACGTTTTCAATAATATTTATGACTCCCGGTGGGATAGCGAGGTGGCAATTGATGCAAATAAAACAATGTGTTCATCCGGGTGGTGTGGGAGGCATGACATAAGGTACCCGTTCAGGCTGAATAATAGTAGTCCAAGCCACTGTGGTGAGCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAGTCAATTAACTATAACAACTACACAATTCGACTAGTTGACGTCAATGTTCCCCTGCATACCCATAATCACTCTTCTCTCCCTAGTTATTCTTTGACCTCCTCCAACTTCACCAGAGATGATCCATATCAATATTGGTTCTATACACAGCATTTTAACGATGTTATTACATTAACAAAGCAGATGGTATATTTGATGAGGTACCCACCATATGGAGTAGAATCTTCTACTGCTGTTGCAAATTGCATGAATGGATCCTATGCACTTGGGAGTACATTCTATGTCAGTGATCTTGACAAGCGTCTCCAGGATTTGGCGTTCAGAGACTCATGTCATATAGATTGGATGTATTTGACTTCATGGCCTACTGAAATCAAGCAGATCAACATTTCATGCACAGACATCCATCGTTTGCTGCTCTACGGGTTTGAACTTTCTTGGATGAAAGGATATTGCTATAATGACACAGACTTTGCCATTCTCGGTGATCATAACAACATCGTTTGTTATAACAATCATTACGAAAGATCTCCATTTGATAATTATGTAGTTTCATGGATTGTTATATGTCTAGTGAATGGAACGATTTTATTTTTACTTGGCAAATTTGGACTTGGAGCTTTGTTCATCGTTATCTTCTGCATATGTAAATGGAGACGAAGACATTTATCCATATATGACAGTATTGAAGATTTTCTGCGAAGTGACAATAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTTTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCAAATCCAATGGCCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCTTTAGAAAAATACATATTTTCACCTCAAGACAGTGCTTCCTTAAGTTGTGAAAAACTCTATACCATTTCCCTTGGAGTGGCACGTGGTATTGAATACTTGCATAATGGCTGTGATATGAAAATTCTGCACTTTGACATCAAGCCTCACAACATTCTTTTGGATGAAAACTTCAATCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAAATGGCAGATAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCTTGTCAGATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGCTGAAGAGATGAAGTTGGCAAAGAAAATGATGATTGTGGCATTGTGGTGTATACAGACAAAGCCTAATGATCGACCTTCAATGAAGAAAGTTGTGGAGATCTTGGAACAAGATGAAGACTTATTGGAAATGCCTCCTAAGCCTTACTTCTATCCACTTGATGAACCTGCAGACGAAGTCGGAGAAGAAAACAGTTCAAGGCTATCCTCTGTTATCTCATCAGTTACTGGTTCCAAAGAATAG 1992 0.3931 MLSLCSFLVPLLLLLGISSYVFNNIYDSRWDSEVAIDANKTMCSSGWCGRHDIRYPFRLNNSSPSHCGEHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDVNVPLHTHNHSSLPSYSLTSSNFTRDDPYQYWFYTQHFNDVITLTKQMVYLMRYPPYGVESSTAVANCMNGSYALGSTFYVSDLDKRLQDLAFRDSCHIDWMYLTSWPTEIKQINISCTDIHRLLLYGFELSWMKGYCYNDTDFAILGDHNNIVCYNNHYERSPFDNYVVSWIVICLVNGTILFLLGKFGLGALFIVIFCICKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQDSASLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSMTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMADSRRKNLNAQTENSCQIYFPFWVYDELQDGREITIENDTAEEMKLAKKMMIVALWCIQTKPNDRPSMKKVVEILEQDEDLLEMPPKPYFYPLDEPADEVGEENSSRLSSVISSVTGSKE* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0489 663 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Amo08g0489 663 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 39 247 - -
Amo08g0489 663 PANTHER RUST RESISTANCE KINASE LR10-RELATED 253 642 IPR045874 GO:0004672
Amo08g0489 663 Pfam Wall-associated receptor kinase galacturonan-binding 43 107 IPR025287 GO:0030247
Amo08g0489 663 MobiDBLite consensus disorder prediction 646 663 - -
Amo08g0489 663 ProSiteProfiles Protein kinase domain profile. 347 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0489 663 SUPERFAMILY Protein kinase-like (PK-like) 328 619 IPR011009 -
Amo08g0489 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Amo08g0489 663 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 253 642 - -
Amo08g0489 663 Pfam Protein kinase domain 350 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0489 663 Gene3D Transferase(Phosphotransferase) domain 1 422 627 - -
Amo08g0489 663 PANTHER RUST RESISTANCE KINASE LR10-RELATED 39 247 IPR045874 GO:0004672
Amo08g0489 663 MobiDBLite consensus disorder prediction 629 663 - -
Amo08g0489 663 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0489 663 Gene3D Phosphorylase Kinase; domain 1 326 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0489 Amo-Chr8 9116671 9120223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0489 34 659 Receptor kinase-like Gene Family AT5G38260 35.693 1.95e-109 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo08g0489 Pkinase 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0489 - - aip:107607706 1030.78