Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0458 ATGGCCTTATCAAGCTCATATATACAAAGATTCCTCTTGGGCAAGCTCCATAGCCGCTTCTCCTCCAACCACAGAAACCCCTTTGCTGCTGTTACATGCACAAGCAGGTGCTACTCTGCCATTGCCATTGATGCACCTTCATCTTTAGCTGAGGCTCCTGGTGTAAGATGGGGATCCATAGCTTTGCAGGGTTTAAGGGAAGAGATGGAGGATGATATCATTGTTCGCCCTGATGGCCTTCATGGATTCTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGCTTCTCTTCTGTTGAGTTCCTCAGTGCAAACCATAGGGATGAGCTCTACAAGGAGTGTCTTGAAGCCTTACAAGGTGGGTTAGTATTGGTTGAGAAAGATTTCAAAGCCACTAAAGAAGCATTAGAGCAAGCATTTGCCAAAGCTGATGCCAAGTTGTTAAAATGGCTTGAAATGAAGGGAGAGGAGGACGAATCGGGCGCAACAGCAACTGCAGTGTTCATAGGGGACGATACGCTGCTCGTTTCACACATTGGCGACTCATCTGTGGTTCTATCTAGAGCTGGAAAAGCAGAAATGGTTACTAGTCCTCACAGACCATATGGGAGCAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTGAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTCGGGGACTTAAGATACAAAACAAAGAAGAATGAGATGCTACAAAAAGGAGTTCAAGAAGGACGATGGTCAGAAAAGTTTATCTCTCGGGTACGGCTCAACAATGATTTAGTTGTTGCATATCCTGATATTTATCAAGTAGATCTTGGCTCAGATGCTGAGTTTATAGTATTAGCATCAGATGGCTTATGGGATTATATGAGCAGCTCAGATGCAGTTTCCTTTGTGAGGGAACAGTTACAAAAGCATGGAAACATTCAGGTAGCCTGTGAAGCACTTGCACAAGCAGCTATGGACCGTAGAACACAGGATAATGTGAGCATTATAATTGCTGATTTAGGGAAGACAGATTGGGAGAATGTGGCAGTGCAGCAACAAAATATGGTATTGGAGCTGCTTCAAGCCCTTGCTACCATTGGTATTGTGTCCATTGGAATTTGGTTTTCGTCTCAGCTTTCATTATAG 1170 0.4393 MALSSSYIQRFLLGKLHSRFSSNHRNPFAAVTCTSRCYSAIAIDAPSSLAEAPGVRWGSIALQGLREEMEDDIIVRPDGLHGFSFAAVFDGHGGFSSVEFLSANHRDELYKECLEALQGGLVLVEKDFKATKEALEQAFAKADAKLLKWLEMKGEEDESGATATAVFIGDDTLLVSHIGDSSVVLSRAGKAEMVTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDLRYKTKKNEMLQKGVQEGRWSEKFISRVRLNNDLVVAYPDIYQVDLGSDAEFIVLASDGLWDYMSSSDAVSFVREQLQKHGNIQVACEALAQAAMDRRTQDNVSIIIADLGKTDWENVAVQQQNMVLELLQALATIGIVSIGIWFSSQLSL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0458 389 PANTHER PROTEIN PHOSPHATASE 2C 57 10 385 - -
Amo08g0458 389 PANTHER PROTEIN PHOSPHATASE 2C 10 385 IPR015655 GO:0004722|GO:0006470
Amo08g0458 389 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Amo08g0458 389 SUPERFAMILY PP2C-like 49 349 IPR036457 -
Amo08g0458 389 Pfam Protein phosphatase 2C 58 341 IPR001932 -
Amo08g0458 389 Gene3D - 55 355 IPR036457 -
Amo08g0458 389 CDD PP2Cc 63 348 IPR001932 -
Amo08g0458 389 SMART PP2C_4 46 346 IPR001932 -
Amo08g0458 389 ProSiteProfiles PPM-type phosphatase domain profile. 56 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0458 Amo-Chr8 8634528 8637200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0458 1 325 PP2C-type Phosphatase Gene Family AT4G27800 60.606 9.02e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0458 K04457 - gmx:100784071 622.854