Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0443 ATGGAGTACGGGAGGCTTGGTCCTACTGACTTATCTCGTGCCGATGAAACTCCGGTTAATAGGCCGAGATCCTCTACAACTGCCAACACCAAAATTATACTCTTCTCGCTTCTTGCTATTGTTCTCATTGTCGCTTCTGCCATCTCCGCCGTACTTGTTACCGTCGTCCGATCTCGCGCTTCCACCGACGACGGACGATTAAAGGAACCTACGCTCGCTGGCAAACCGACGCAGGCCATCTCACGCACCTGCAGCAGGACAAGGTTCCCGGACCTCTGTGTTAACTCGCTTCTCGATTTTCCGGGATCCACGGCGGCGACGGAGCGGGACTTAGTCCACATTTCCTTCAACATGACGCTGCAGCACTTTACTAAAGCGCTCTACATCTCCGCTGCGATTTCTTCCTCCGGTGTGTACGCCTCCATGGATCCACGCTCCCGTGCCGCATACGACGACTGCCTTGAGCTTCTCGACGAGTCCGTGGACGCCATAGCAAGATCTCTCACTACAGTCTCTCCCTCCGGCGCATCTCCCGGCGGCACTGTACGACCGCTTGGATCGTCCTCGGACGACGTGCTCACGTGGCTAAGCGCCGCGCTTACAAACCAGGAGACGTGTGCCGAGGGGATGGAAGGCGCCTCCGGCGCCGTGAAGAGCCAGATGGCGAACAACCTGAAGGACTTGTCGGAGCTGGTGAGTAACTGTTTGGCGATATTCTCGGCTTCCGGTGCCGGCGACGACTTCTCCGGTGTCCCTATACAGAACCGGCGAAGGTTGATGGCAATGCGAAAGGAAGAGGTGGAGGAGAAGGAGGATTTCCCTAAGTGGCTGAGTAAAAGAGATAGGAGGTTGTTGAGTTTACCGGTTTCGGCCGTACAGGCGGATGTCATCGTCTCAAAGGACGGTAACGGCTCCGTCAAGACCATCGCCGAAGCCATTAAGAAGGTGCCGGAGTACGGTAGCCGGCGATTTGTTATTTACATAAAGGCAGGAAGGTACGAAGAGGACAATTTAAAGGTGGGACGGAAGAAAACCAACGTCATGATCATAGGGGACGGCAAGGGCAAGACGGTCATCACGGGCGGTAGAAACGTTTTGCAGGAAATGACCACATTTCATACTGCATCCTTTGCTGCGAGTGGCTCTGGATTCATCGCAAGAGACATGACATTCGAGAACTACGCGGGCCCAGCGAAGCACCAAGCGGTGGCTCTCCGCCTCAGTTCAGACCACGCGGTGGTTTACCGGTGCAACGTCATAGGCTACCAAGACACATGCTACGTTCACTCAAACCGTCAATTCTTCAGAGAATGCGACATATACGGTACCGTAGACTTCATATTCGGCAACGCCGCAGTGGTATTCCAGAACTGCAGCCTCTACGCTCGAAAGCCCATGCCCCAACAAAAAAACACAATAACGGCCCAAAACAGAAAAGACCCGAATCAGAACACAGGCATTTCGATCCATAACTGTCGGATCCTAGCCACGTCAGATCTCGAGGCATCAAAGGGTAGCTTCCCAACATATCTGGGCCGTCCATGGAAAATGTACGCTAGGACCGTATACATGATATCATACATCGGTGATCACGTGCATCCACGTGGATGGTTAGAGTGGAACACAAGCAATTTTGCACTGGACACGTGTTACTACGGTGAGTACATGAATTTTGGGCCGGGTGCTGCCATCGGTCAACGGGTTAAATGGGCTGGGTATCGGATCATCACGTCCACCGTGGAAGCAAGCAGATTCACGGTGGGCCAATTCATTTCAGGCTCCTCGTGGTTGCCGTCCACCGGAGTGGCTTTTATTTCTGGCCTATCAACCTGA 1833 0.5368 MEYGRLGPTDLSRADETPVNRPRSSTTANTKIILFSLLAIVLIVASAISAVLVTVVRSRASTDDGRLKEPTLAGKPTQAISRTCSRTRFPDLCVNSLLDFPGSTAATERDLVHISFNMTLQHFTKALYISAAISSSGVYASMDPRSRAAYDDCLELLDESVDAIARSLTTVSPSGASPGGTVRPLGSSSDDVLTWLSAALTNQETCAEGMEGASGAVKSQMANNLKDLSELVSNCLAIFSASGAGDDFSGVPIQNRRRLMAMRKEEVEEKEDFPKWLSKRDRRLLSLPVSAVQADVIVSKDGNGSVKTIAEAIKKVPEYGSRRFVIYIKAGRYEEDNLKVGRKKTNVMIIGDGKGKTVITGGRNVLQEMTTFHTASFAASGSGFIARDMTFENYAGPAKHQAVALRLSSDHAVVYRCNVIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSLYARKPMPQQKNTITAQNRKDPNQNTGISIHNCRILATSDLEASKGSFPTYLGRPWKMYARTVYMISYIGDHVHPRGWLEWNTSNFALDTCYYGEYMNFGPGAAIGQRVKWAGYRIITSTVEASRFTVGQFISGSSWLPSTGVAFISGLST* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0443 610 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 239 IPR006501 GO:0004857
Amo08g0443 610 PANTHER PECTINESTERASE 22 608 - -
Amo08g0443 610 Gene3D - 289 608 IPR012334 -
Amo08g0443 610 PANTHER PECTINESTERASE 22 608 - -
Amo08g0443 610 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 241 IPR035513 -
Amo08g0443 610 Pfam Pectinesterase 295 593 IPR000070 GO:0030599|GO:0042545
Amo08g0443 610 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 240 IPR035513 -
Amo08g0443 610 MobiDBLite consensus disorder prediction 1 24 - -
Amo08g0443 610 CDD PMEI-like_3 84 241 - -
Amo08g0443 610 Pfam Plant invertase/pectin methylesterase inhibitor 79 238 IPR006501 GO:0004857
Amo08g0443 610 SUPERFAMILY Pectin lyase-like 290 607 IPR011050 -
Amo08g0443 610 ProSitePatterns Pectinesterase signature 2. 440 449 IPR033131 -
Amo08g0443 610 SMART PMEI_2 75 238 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0443 Amo-Chr8 8504621 8508727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0443 1 609 Carbohydrate Esterase AT5G53370 63.029 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0443 - - gmx:100808236 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0443 08 8504621 8508727 Amo17g2499 17 122779482 122783867 hybridization