Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g0438 | ATGGACTTGGAAAGCATCGAGTGTGTGTCATCCTCGGATGGCATGGACGAGGATGAGATCCACCCTCACCATCATTCTGAGTTTCCTTCCACAAAACCACGCAATGGAGGAGCCAATAACAACAATTCTGTGGGTCCCAATGCCATAACTCCTGCAACCAGCGTCCATGAGTTGCTGGAATGCCCTGTATGTACAAATTCAATGTACCCCCCAATTCATCAGATTCGATGGGGGATTGGTGAGGGAGAGCAAAATACCTCGGATTTGATTTTGGAGTTTGGATTTTCCTTACATGATGGAAGGGAATTGAGTCATGAATTTGGTTTTAGCAAGTTACCAAAATTTTGTTCAATTTGCAGGACACCTCTGCAAAACTTGTATGTATTTGCCAAAATGGGGTATAAAAGTTGTAACAAGTTGATTGATTTGCAGTGCCACAATGGGCACACGCTGTGTTCCACATGTAAAACAAGGGTACACAACCGGTGCCCCACTTGTAGACAAGAGCTTGGAGATATCAGGTGCCTAGCCTTGGAGAAGGTGGCTGAATCACTTGAGTTACCATGCAAGTACTATTCCCTTGGATGTCCAGAAATATTTCCATACTACAGCAAGCTTAAGCATGAGACTGTATGCAATTTTAGGCCATACAGTTGTCCTTATGCTGGATCAGAGTGTTCTGTTGTTGGGGATATTCCCTTCCTCGTCGCTCATTTGAGGGACGATCATAAAGTGGACATGCACACAGGATGCACATTCAACCATAGATATGTGAAATCAAATCCCAGGGAAGTAGAGAACGCAACCTGGATGCTCACAGTGTTTCATTGTTTTGGTCAGTACTTCTGCCTCCACTTTGAAGCTTTCCAGCTTGGGATGGCTCCTGTGTACATGGCATTCCTTCGTTTTATGGGTGATGAGAATGAGGCTCGGAACTATAGCTATAGCCTAGAGGTTGGGGCCAATGGCAGGAAACTCATCTGGGAGGGTACGCCTAGAAGTGTTCGGGATAGCCACCGGAAAGTTAGGGATAGTCATGATGGCCTCATTATTCAACGAAACATGGCCCTATTTTTCTCTGGTGGGGATAGGAAGGAGCTGAAGCTCAGAGTCACTGGAAGAATATGGAAGGAACAACAGAATCCAGATGGTGGAGTGTGCATACCAAATCTTTGTAGCTGA | 1182 | 0.4535 | MDLESIECVSSSDGMDEDEIHPHHHSEFPSTKPRNGGANNNNSVGPNAITPATSVHELLECPVCTNSMYPPIHQIRWGIGEGEQNTSDLILEFGFSLHDGRELSHEFGFSKLPKFCSICRTPLQNLYVFAKMGYKSCNKLIDLQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDGGVCIPNLCS* | 394 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g0438 | 393 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SINAT3 | 1 | 385 | - | - | |
Amo08g0438 | 393 | MobiDBLite | consensus disorder prediction | 32 | 48 | - | - | |
Amo08g0438 | 393 | MobiDBLite | consensus disorder prediction | 14 | 30 | - | - | |
Amo08g0438 | 393 | CDD | Sina | 245 | 373 | - | - | |
Amo08g0438 | 393 | ProSiteProfiles | Zinc finger SIAH-type profile. | 184 | 244 | IPR013010 | GO:0008270 | |
Amo08g0438 | 393 | SUPERFAMILY | TRAF domain-like | 184 | 376 | - | - | |
Amo08g0438 | 393 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 179 | 238 | IPR013083 | - | |
Amo08g0438 | 393 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 1 | 385 | - | - | |
Amo08g0438 | 393 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Amo08g0438 | 393 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 239 | 372 | IPR008974 | GO:0005515 | |
Amo08g0438 | 393 | Pfam | Seven in absentia protein family | 173 | 372 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Amo08g0438 | 393 | ProSiteProfiles | Zinc finger phorbol-ester/DAG-type profile. | 104 | 175 | IPR002219 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g0438 | Amo-Chr8 | 8430920 | 8432733 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g0438 | 144 | 379 | C3H Transcription Factor Family | AT2G41980 | 81.780 | 4.71e-147 | 417 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g0438 | K04506 | - | rcu:8272429 | 543.117 |