Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0398 ATGGCTTCAGATCCAAAAATTCACAAGTTCGAAGAGGTGGCAAAGCACAATCAGACCAAAGATTGCTGGCTTATTATTAATGGAAAGGTCTACGATGTCACCCCTTTTATGGACGACCATCCTGGAGGTGATGAAGTTTTGTTATCTGCAACAGGAAAAGATGCAACCACCGATTTTGAGGATGTGGGGCACAGTGATTCTGCAAGAGACATGATGGACAAATACTACATAGGGGAGATTGATGCATCAACTGTCCCATTAAAGCGCACCTACATTCCACCCCAGCAAGCTAACTATAACCCTGACAAGACTCCAGAATTTGTGATCAAGATTTTGCAGTTCCTGGTTCCTCTCCTGATATTGGGTTTAGCCTTTGCTGTTAGGCACTACACCAAGAAAGATTAG 405 0.4346 MASDPKIHKFEEVAKHNQTKDCWLIINGKVYDVTPFMDDHPGGDEVLLSATGKDATTDFEDVGHSDSARDMMDKYYIGEIDASTVPLKRTYIPPQQANYNPDKTPEFVIKILQFLVPLLILGLAFAVRHYTKKD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0398 134 Gene3D - 1 86 IPR036400 -
Amo08g0398 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Amo08g0398 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Amo08g0398 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Amo08g0398 134 SMART Cyt_b5_2 8 81 IPR001199 -
Amo08g0398 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 90 IPR036400 -
Amo08g0398 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Amo08g0398 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Amo08g0398 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Amo08g0398 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Amo08g0398 134 PANTHER CYTOCHROME B5 1 132 - -
Amo08g0398 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0398 Amo-Chr8 7708532 7710963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0398 1 134 NADPH P450 reductases AT5G53560 81.343 9.94e-83 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0398 K23490 - gmx:100305929 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0398 08 7708532 7710963 Amo17g2436 17 121248409 121250922 hybridization