Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0393 ATGGCAGATCTCAAAGAGCGGCTACTTCCACCAAAACCTGCGTCAGCTTTAAATGTAAGAGAGACTGCTAATCGACCATCTGCCTCTGGAAGGCTACCTTTTCAAGGTATGGATGTTCTTGGGCTAAAGAAGCGAGGTCAAGGTATCCGATCATGGATTCGTGTTGACACATCTGGGAACTCCCAAGCAATTGAAGTAGACAAGTTTACAATGATGCGACGTTGTGATCTACCTGCTCGTGATCTTCGCCTTCTTGATCCTCTGTTTGTATACCCCTCAACGATCCTTGGTAGAGAAAAGGCTATTGTTGTAAATCTAGAGCAGATACGGTGTATTATTACGGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTACTGCACTATGTGATGGAGCTACAACGACGGTTGACAACTGGGGTAGGTGAGGTCTGGCAGTCGGACGGTTCTGACATGAGCCGAAGGAGGGGAAGTAGGACTTTTGAAAATGTCATTAGCAACACTTCCCCTGATTATTTGCCGTTTGAGTTTAGGGCTCTTGAAGTTGCCCTGGAAGCGGCATGCACATTTCTTGACTCTCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCTTTGCTGGATGAATTAACATCAAAGATCAGTACTCTTAATTTAGAACGTGTTCGTCGACTGAAAAGCAGACTTGTTGCACTGACTAGGAGGGTTCAAAAGGTGGTTAGAGATGAAATAGAGCAACTTATGGATGATGATGGTGATATGGCCGAAATGTACCTTACGGAGAAGAAAAGACGGATGGAGTTATCATTTTGTGGAGATCAGTCGTTGGTTGGATATAGGTCTCTTGATGGTGCATCTATTTCTGCCCCCGTTTCTCCTGTTTCATCACCTCCTGATTCTCGAAGGCTTGAAAAGAGTTTGAGCATTGCTAGGAGTCGACATGAGAGCTCGAGGAGCACTGAGAGTACCACCGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATACTTTGTTGTCATTGACAGCACGCTAAACAAGTTGACATCATTGAAAGAGTACATTGATGATACGGAAGATTTTATCAACATTCAACTGGATAACGTGCGTAATCAGCTTATCCAGTTTGAGCTTTTGCTCACAACTGCAACATTTGTTGTTGCCATCTTTGGTGTGGTGGCAGGAATCTTTGGGATGAATTTTGAAATCCCATTATTTGATGAACCCACTGCATTCCATTGGGTCCTTATAATTACAGGAGTTTGTGGAGTCTGCATATTTTGTGCATTTGTTTGGTTCTTCAAGTACAGAAGACTCATGCCCCTGTAG 1332 0.4354 MADLKERLLPPKPASALNVRETANRPSASGRLPFQGMDVLGLKKRGQGIRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTGVGEVWQSDGSDMSRRRGSRTFENVISNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFCGDQSLVGYRSLDGASISAPVSPVSSPPDSRRLEKSLSIARSRHESSRSTESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDEPTAFHWVLIITGVCGVCIFCAFVWFFKYRRLMPL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0393 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 443 - -
Amo08g0393 443 Gene3D Magnesium transport protein CorA, transmembrane region 129 374 - -
Amo08g0393 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Amo08g0393 443 Gene3D - 39 123 - -
Amo08g0393 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Amo08g0393 443 MobiDBLite consensus disorder prediction 289 303 - -
Amo08g0393 443 Pfam CorA-like Mg2+ transporter protein 333 430 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo08g0393 443 MobiDBLite consensus disorder prediction 305 325 - -
Amo08g0393 443 Coils Coil 223 243 - -
Amo08g0393 443 MobiDBLite consensus disorder prediction 289 325 - -
Amo08g0393 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Amo08g0393 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 443 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0393 Amo-Chr8 7591841 7594457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0393 1 443 MRS2 Gene Family AT1G16010 85.393 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0393 K16075 - gmx:100779803 733.406