Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0387 ATGAGGAGCAGTCGAGTAGTTAAGCGCATTTCAGAATGCCTCGTGAAGCCACACCTCCCGAACGAGGAATCAACGCAGTTGTGCCACTTAACTCCGTGGGATATTGTCCCCTTGTCCATTCATTATATCCAGAAAGGCCTTCTTTTCACGAAACCACAAAACCAGCCACAAGATTTCACCCATAATCTGTTGCATAATCTGAAGCATTCCCTCTCTCTTACCCTTCTCCATTTCTATCCACTTGCAGGCCGCCTTGTGACTCACCAAACCCAAGACCCTCCCTCTTATTCTGTCTCTCTTGATTGCATCAACTCTCCAGGAGCAAGATTCATCCATGCAATCTTAGACCTCACCGTATCCGATATCCTCTCTCCTGTCTATGTCCCCCCCATTGTTCACTCGTTCTTCGACCTCAACAAAGCAGTCAACCATGACGGTCACGCCATGCCTCTCTTGTCTGTCCAAGTCACTGAGCTAATCGATGGTGTTTTCATAGGCTGTTCCATGAACCACTGTGTCGCTGATGGCACTTCTTATTGGAGCTTCTTCAACACGTGGTCTGAGATATTTCAATCTCAAGCCAAAGGGGAAGATGTTAATGTTGTCAACATTTCTCACCGACCAATCCACAAGCGCTGGTTTCCAGAGTTAATTAATCTTCCCTTCAAACACCATGACGAGTTTATCTGCAGATACGAAGCACCCAAGCTGAGAGAGAGGATCTTCCACTTCACAGCTGATTCTATCGCGAAACTCAAAGCCAAAGCCAACAAAGATTCCAGCACCAACGAAATCTCTTCGTTCCAGTCATTGTCAGCTCACGTTTGGAGAAGCATAACACGTGCTCGCAGCGTGCCGTGTGATCAAAGAAGCAGTTGCATAGTGGTTATAAACAACAGAACGAGAATGGAACCACCTCTGCCGCAAGAGTACTTCGGAAACTCAGTTAACTCTGTGAGAGCGGTTGCAACAGCAGGGGAGCTGAGTGAGCATGATCTGGGTTGGGCAGCGGGTAAGGTGCACGAAGCTGTCGCAAACTACAACCACAGAGTGGTGATGGATTGGCTCAACCGGTGGGTGCGATCCCCTGCTATTCATCAAACCGGTCGCTTTATTGATCCGTACAGTGTGGTGATGAGCAGTTCTCCAAAGTTCAATGTTTATGGGAATGAATTTGGAATGGGGAAAGCCGTGGCGGTTCTGAGTGGATATGCCAACAAGTTTGACGGCAAGGTGACGTCATATCCTGGCCGCGAAGGTGGGGGAAGCATTCAATTGGAAGTGTGTCTTTCTCCTCATACGATGAGCGCCTTGGAATCTGACCAACACTTCATGGATACGAAAAAGATCACATCCCCTGTTTCGGAATGCTTCGTGAAGCCACACCGCAGCACGCAAGACTCAACACAACTGTGCCACCTAACACCATGGGATCTTGCAATGCTCTCCGTCCATTACATCCAAAAGGGACTTCTCTTCGAGAAGCCACAAGACCAACCTCAAAATTTCACCCGAAATCTATTGCACGATCTCAAACACTCACTCTCTCTTACCCTTGTCCATTTCTATCCCTTGGCTGGTCGCCTTGTTACCCACCAAACCCAAGATCCTCCCTCTTATTCTGTCTCCGTTGACTGCGTCAACTCTCCCGGAGCAAAATTCATCCACGCAACGGTGGATCTCACCGTATCTGATATCCTCTCCCCCGTTGACGTCCCTGCGATTGTTCAGTCATTCTTTGACCATGACAGAGCCGTCAGTCATGACGGCCACCACGTGTCCCTCTTAACCATCAAAGTCACTGAACTAATCGACGGCGTTTTTATTGGCTGCTCCATGAACCATTCCCTCGCTGATGGCACTTCTTACTGGAACTTCTTCAACGCTTGGTCTGAGATCTTTCAATCTCAATCTCAATCTAAATTCAAAGGGGAACAAGACGTTGATGTTACCAACATTTCCCACAAGCCCATTCACAAGCGCTGGTTTCCACAGGGTTGCGGCCCAATAATCAATCTCCCATTCAAACACCATGACGAGTTTGTCTGTAGATTCGAAGCACCAAAACTCAGAGAGAGGATCTTCCACTTCAGTGCAGAATCCATTGCCAAGCTGAAAGCAAAGGCAAACCAGGAATCCAACACCACCAAGATCTCTTCATTCCAATCATTGTCAGCACTTGTTTGGAGATGCATCACTCGTGCTCGCAGATTACCGCATGATAGAAAGACGAGTTGCAAGCTGGCAATGAACAATCGAAGCAGAATGGAACCTCCTCTGCCTCAGGAATACTTTGGGAACGTACTTCATGCGGTGAGTGCAGCAATGACAGCAGGGGAATTGCTTGAACATGATCTGGGTTGGGCAGCGTGGAAGATCCACCTGGCTGTTGTGAACCATAATAATGGAGTGACGCTTGAGTTTCTCAAAGAGTGGTTGAAGTCTCCAGTGATCTATCAACATGCTCGGTTCTTTGAACCGGATAGTGTGATGATGGGTAGTTCACCGAGATTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCGGTGGCGGTTCTGAGTGGATATGCTAATAAATTTGATGGGAAAGTGACGTCATACCCTGGCCGCGAAGGAGGTGGAAGCGTTGACTTGGAAATGTGTCTTCTTCCAGATTCGATGTGTGCGTTGGAATCTGACCAAGAGTTCATGAATGCGGTTTCTGCGTCTAATTAA 2718 0.4779 MRSSRVVKRISECLVKPHLPNEESTQLCHLTPWDIVPLSIHYIQKGLLFTKPQNQPQDFTHNLLHNLKHSLSLTLLHFYPLAGRLVTHQTQDPPSYSVSLDCINSPGARFIHAILDLTVSDILSPVYVPPIVHSFFDLNKAVNHDGHAMPLLSVQVTELIDGVFIGCSMNHCVADGTSYWSFFNTWSEIFQSQAKGEDVNVVNISHRPIHKRWFPELINLPFKHHDEFICRYEAPKLRERIFHFTADSIAKLKAKANKDSSTNEISSFQSLSAHVWRSITRARSVPCDQRSSCIVVINNRTRMEPPLPQEYFGNSVNSVRAVATAGELSEHDLGWAAGKVHEAVANYNHRVVMDWLNRWVRSPAIHQTGRFIDPYSVVMSSSPKFNVYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSIQLEVCLSPHTMSALESDQHFMDTKKITSPVSECFVKPHRSTQDSTQLCHLTPWDLAMLSVHYIQKGLLFEKPQDQPQNFTRNLLHDLKHSLSLTLVHFYPLAGRLVTHQTQDPPSYSVSVDCVNSPGAKFIHATVDLTVSDILSPVDVPAIVQSFFDHDRAVSHDGHHVSLLTIKVTELIDGVFIGCSMNHSLADGTSYWNFFNAWSEIFQSQSQSKFKGEQDVDVTNISHKPIHKRWFPQGCGPIINLPFKHHDEFVCRFEAPKLRERIFHFSAESIAKLKAKANQESNTTKISSFQSLSALVWRCITRARRLPHDRKTSCKLAMNNRSRMEPPLPQEYFGNVLHAVSAAMTAGELLEHDLGWAAWKIHLAVVNHNNGVTLEFLKEWLKSPVIYQHARFFEPDSVMMGSSPRFNMYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSVDLEMCLLPDSMCALESDQEFMNAVSASN* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0387 905 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 446 901 - -
Amo08g0387 905 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 447 - -
Amo08g0387 905 Gene3D - 230 441 IPR023213 -
Amo08g0387 905 Gene3D - 683 893 IPR023213 -
Amo08g0387 905 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 447 - -
Amo08g0387 905 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 446 901 - -
Amo08g0387 905 Pfam Transferase family 457 898 - -
Amo08g0387 905 Pfam Transferase family 8 444 - -
Amo08g0387 905 Gene3D - 8 225 IPR023213 -
Amo08g0387 905 Gene3D - 454 669 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0387 Amo-Chr8 7481767 7498527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0387 511 892 Monolignol Biosynthesis Gene Families AT5G48930 26.812 7.18e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0387 - - dcr:108194865 916.761