Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0373 ATGCACTTCTTTGAAGGATTATTTAATGGCGTCGAAAAAGGGTTTGGAAAAGAAGCTACCAAGACAAAGAATCACCTTGCTGCTGTAGTTGCTGGAGATGACAAGGGATCACAGATATTATTGCTCAATGCTGTTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGCGTTGAAGGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAAAAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAAATATGGAAGAATTCTCAACCATTCATTGATTGGCCTCAGAATGCTGAATCAGAATCGGAGGAAGAATGA 351 0.4131 MHFFEGLFNGVEKGFGKEATKTKNHLAAVVAGDDKGSQILLLNAVEEFCYKKGSNALKEVALILKALYDVDLVEKEHVVHWYSKGLKGDKKDSQIWKNSQPFIDWPQNAESESEEE* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0373 116 MobiDBLite consensus disorder prediction 97 116 - -
Amo08g0373 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 4 116 - -
Amo08g0373 116 Pfam eIF4-gamma/eIF5/eIF2-epsilon 38 116 IPR003307 GO:0005515
Amo08g0373 116 Gene3D - 1 116 - -
Amo08g0373 116 SMART 542_3 24 112 IPR003307 GO:0005515
Amo08g0373 116 ProSiteProfiles W2 domain profile. 1 116 IPR003307 GO:0005515
Amo08g0373 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 116 IPR045196 GO:0003743|GO:0006413
Amo08g0373 116 CDD W2_eIF5 3 114 - -
Amo08g0373 116 SUPERFAMILY ARM repeat 8 110 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0373 Amo-Chr8 7259754 7260104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0373 3 109 Eukaryotic Initiation Factors Gene Family AT1G77840 55.556 4.27e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0373 K03262 - aip:107619007 201.83