Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0366 ATGAAAGCTACTACTCCTCCTCCTTACACAGCAATGCCAATTCAAATGCAAAGCTTTTCTTCATCCGCGTTATTGGCGGAGCCAGACCTCTCCTTAAACATTAGCCCTCCTTTCCTTTCTGCCAAAGGAACATTCAAAGATATGTGCTCCTCAATCTCTGATTCAGGTAGTAGTGGAAGCGATGCAAGCCATGATAATAATAATAATAATAATAATTGCTTCTTTCACCACACCCACACTGTTCCACAACCGACATTGACATTAGGGTCTGGACCTGCATCAAACTTGAATCATCATCATCATTATCATCATCTCCATCAGTATCCAATGCAAGGGCTCTCAAGAAACTACTTCAATCATCATCCTCACCAACCTCAAATCCATTGCCGCTCCGATTTCAAACGAAATGGTGGCGGGAGAAGAAGCATGAGAGCTCCCAGAATGAGATGGACTACCACACTCCATGCTCATTTTGTTCATGCTGTTCAGCTTCTTGGCGGTCATGAAAGGGCAACTCCGAAGTCAGTGTTAGAGTTAATGAATGTTAAGGATCTAACTCTAGCTCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGTCCCAGGTAATAATAATAATAATAATAATCTTGGAGATGCGCTAGCTGTTGTATGTAATGGTCACAAGGTAGATATGGGGTTCGAGCAGCAAAGGCAAGAGGTCGTTGTGGATCATCTGCATGCTCAGAGAGGCCTTCTCCAACACCCACTGGTGCAACTGCAACAATCCCAAAGGTCATCATGTCAATCACGACTACTAGAGACAAATACAAATATTACTCGACAAAAACCCGATATCAGCTTCGTGTATTCTCGTCTCCAAGATGGCAATGAAATCATGAATAATCACGGAGGGTTGTCGAATTACTTGAAGATGAAGGAGAGGTCGGACTGTAACAATTTGTCGTCAGATTCAGAAGGCGTTATTGATCTGGAATTCACTCTTGGAAGGCCAACACACCATCAGGATGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAA 1062 0.4275 MKATTPPPYTAMPIQMQSFSSSALLAEPDLSLNISPPFLSAKGTFKDMCSSISDSGSSGSDASHDNNNNNNNCFFHHTHTVPQPTLTLGSGPASNLNHHHHYHHLHQYPMQGLSRNYFNHHPHQPQIHCRSDFKRNGGGRRSMRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKVPGNNNNNNNLGDALAVVCNGHKVDMGFEQQRQEVVVDHLHAQRGLLQHPLVQLQQSQRSSCQSRLLETNTNITRQKPDISFVYSRLQDGNEIMNNHGGLSNYLKMKERSDCNNLSSDSEGVIDLEFTLGRPTHHQDESSRELTLLKC* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0366 353 MobiDBLite consensus disorder prediction 125 139 - -
Amo08g0366 353 SUPERFAMILY Homeodomain-like 143 200 IPR009057 -
Amo08g0366 353 Gene3D - 145 202 - -
Amo08g0366 353 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 23 353 IPR044847 GO:0000976|GO:0006355|GO:0010158
Amo08g0366 353 Pfam Myb-like DNA-binding domain 147 198 IPR001005 -
Amo08g0366 353 MobiDBLite consensus disorder prediction 124 143 - -
Amo08g0366 353 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 146 199 IPR006447 GO:0003677
Amo08g0366 353 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 23 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0366 Amo-Chr8 7183539 7186490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0366 28 218 G2-like Transcription Factor Family AT5G42630 53.810 4.03e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo08g0366 Myb_DNA-binding 1.6e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0366 - - adu:107495895 238.81