Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0353 ATGATCATCATCAGAAAGCACACAATTTTGATCCTTCTAGTGTTATGCTTTCTCTTCCTCTCTCTAAGCACAGCACAAGTGAACTACCGAACGTGCAACCAAACATGCGGTTCATCCAAACCTTACCCTTACCCTTTCGGATTCTCCTCCGACTGCGGAATCCGCCTCAATTGTACCACCGACGGCGGAATCTTCATCGGTAAATTCCCAGTCCAAGAAGTAACAACGGACAGCATAATCGTCGGCATCAAAGCACAGTGCAATCGCCCATTTTATACATTCCACGAACTCTTCAGCCACAAGTACGCTCCCACATCGGGGAACGTGATCTTCGTGCAGAACTGCTCCAAAACGGCGTCGTCTTGCACCGTTCCGGAGGCTATGGTGCGGGAATACTTTGACTACTCTGAGGATTGCAGAGAGGGAAGYAGCTTGAGCTGCTACTTCGAAAACAACAGCACCAACAAGTTCTTGAATAAGAGCATCTTGGATGGGTACGGCTGTGGCAACTTTATGTCTTCCATCTGTTCGGAAAATTTGAGGAACAATTCCGGTGCTACGGTGTCGTTGGAGGTAGCCACAATTCAGCTTGGTTGGTGGCTTCAGGGAGCTTGCCAGTGTTCTAGTGATGCTAATTGTACCGAAATTGAGTCCCCCGTTGATCGGAAACCCGGCTTTCGGTGTACCTGCAAGGAAGGCTTTGTCGGCGATGGCTTTCTTGCCGGAACAGGCTGTACGAGAATCAGAGCCTCTTCAGCATGCAACGCAGCCAAGTACATGTCTGGCAGATGTGGAGGAACAGCGAGATTTGTCATCTTGATTGCAGGATTTGCTGTAGGAATTTCAGTGATGATAAGTGCGGTTTCAGTATTTTGTTGTTTGTTTAAAAGGCGCAGCAAATTGAGAGTCACAAAGAGCACAAAAAGGCGGTTCACGGAAGCAACCGTCAACTACAGCGTCCCTATCTATCCCTACAAAGACATAGAGAGAGCCACCAACAGTTTCTCTGAGAAACAACGCCTGGGAACCGGTGCATACGGTACAGTTTACGCGGGAAAACTTCACAACAATGATGAATTGGTTGCMATCAAGAGAATAAAACAGAGGGACGCCAACGACAGCATCGAGCAAGTAATGAACGAGATCAAGCTCCTCTCTTCAGTCAGCCACACTAACTTAGTGCGATTGTTGGGTTGCTWCATAGAACACGGAGAACAGATCCTGGTCTATGAGTTCATGCCGAACGGAACATTGAGTCAGCATCTTCAAAAAGAACGAGGAGACGGTCTTTCATGGCCGATTCGATTAAGAATTGCCACCGAAACAGCACAAGCCATTGCACATCTTCACTCTGCCATGAATCCCCCAATCTACCATAGAGATATCAAATCCAGCAACATACTCTTGGATTCCAATTTCGGTTCAAAGGTAGCTGATTTCGGTCTCTCTAGACTTGGAATGACTGAAATATCCCACATTTCAACGGCGCCACAGGGGACCCCTGGCTATGTTGATCCGCAGTACCATCAAGACTTTCATCTTTCTGACAAGAGTGATGTTTACAGCTTCGGCGTTGTTCTTGTTGAGATCATAACTGGACTCAAGGTGGTTGACTTTACCCGCCCTCATAATGAAGTGAACCTGGCCTCCCTTGCAACTGATAGGATCGGGAACGGGCTCTTGGACGAGATCATAGACCCCTTTCTTGTGCCTCAAGCAAGAAGTGATCCTTGGACACTTTCCTCAATACACAAGGTTGCTGAGTTGGCATTTAGATGCCTTGCGTTCCATAGAGATATGAGGCCTTCAATGACAGAAGTGGCAAGCGAGTTAGAACAACTCACTCTTACTACGTGGCCTAGTTTTGGTGACAATCATAATTGTGTAGCTTCTACAGAGTTATCCTCTTCTTCTTCCTCCTCCTCCTCCTCTAATGAGTGTGAGAAACCACTTAGCAGTAGAACCAAGGTCGGGCTACTAACTGGGCCCAAGTTAAGGTCGTTGTTGGATAGGACCAAAAGTAGCTCACCGGTTTCGGTGCAAGATAGAGAAGTATGGTTGAGTGAACAAAGCTCTCCCTCGTCAAATAGTTTCCCTAGCAAGTCATTTGATTGA 2115 0.4704 MIIIRKHTILILLVLCFLFLSLSTAQVNYRTCNQTCGSSKPYPYPFGFSSDCGIRLNCTTDGGIFIGKFPVQEVTTDSIIVGIKAQCNRPFYTFHELFSHKYAPTSGNVIFVQNCSKTASSCTVPEAMVREYFDYSEDCREGSSLSCYFENNSTNKFLNKSILDGYGCGNFMSSICSENLRNNSGATVSLEVATIQLGWWLQGACQCSSDANCTEIESPVDRKPGFRCTCKEGFVGDGFLAGTGCTRIRASSACNAAKYMSGRCGGTARFVILIAGFAVGISVMISAVSVFCCLFKRRSKLRVTKSTKRRFTEATVNYSVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGKLHNNDELVAIKRIKQRDANDSIEQVMNEIKLLSSVSHTNLVRLLGCXIEHGEQILVYEFMPNGTLSQHLQKERGDGLSWPIRLRIATETAQAIAHLHSAMNPPIYHRDIKSSNILLDSNFGSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPHNEVNLASLATDRIGNGLLDEIIDPFLVPQARSDPWTLSSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLTLTTWPSFGDNHNCVASTELSSSSSSSSSSNECEKPLSSRTKVGLLTGPKLRSLLDRTKSSSPVSVQDREVWLSEQSSPSSNSFPSKSFD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0353 704 Gene3D Transferase(Phosphotransferase) domain 1 413 623 - -
Amo08g0353 704 Gene3D Laminin 205 241 - -
Amo08g0353 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Amo08g0353 704 MobiDBLite consensus disorder prediction 633 651 - -
Amo08g0353 704 Gene3D Phosphorylase Kinase; domain 1 296 412 - -
Amo08g0353 704 CDD STKc_IRAK 341 614 - -
Amo08g0353 704 Pfam Protein kinase domain 335 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0353 704 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 648 IPR045274 GO:0007166
Amo08g0353 704 ProSiteProfiles Protein kinase domain profile. 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0353 704 MobiDBLite consensus disorder prediction 668 704 - -
Amo08g0353 704 MobiDBLite consensus disorder prediction 633 704 - -
Amo08g0353 704 SUPERFAMILY Protein kinase-like (PK-like) 311 612 IPR011009 -
Amo08g0353 704 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Amo08g0353 704 SMART serkin_6 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0353 704 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 24 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0353 Amo-Chr8 6917400 6923006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0353 1 698 Receptor kinase-like Gene Family AT2G23450 49.720 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo08g0353 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0353 - - mtr:MTR_3g111510 944.495