Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0346 ATGGCTGCATCCCTCTCCAAACCCTCTTCTATTATTTTTTCACCACCCAACTCTTGCTTCCACACCAAACCACTCCAAAGCTCCATCTTCTTCCTCAGACACGCACAACCATCCTCCTTCTCCCTCTCATGCAACAACGATGGGGAGAACACGCCCCGCGAAGAGTGCGGCTTCGTTGGCATCCATGGTGACCCGGAGGCCTCTCGCCTCTGCTACCTTGCCCTCCACGCCCTCCAGCACCGGGGCCAAGAAGGCGCTGGCATCGTCGCCCTCAACAACAACCACCTCCAATCCACAACCGGCATTGGCCTCGTTTCCGAAGTTTTCAACGAGTCCAAGCTCAACCAGCTGCCGGGAATTTCCGCTATTGGCCACGATCGGTATTCGACAGCAGGACAGTCTATGCTCAAGAACGTTCAGCCATTCGTCGCAGGCTACCGTTTCGGCTCGGTCGGGGTTGCTCATAACGGCAACCTCATCAACTACTGCTCCCTAAGGGCCAAACTGGAGGACAAGGGTTCTATCTTCAACACAAACTCTGACACCGAGCTTGTCCTTCATCTCATTGCCACCTCCAAGCACAGGCCTTTCCTCCTGAGGATCGTCGACGCCTGCGAGAATCTTCACGGCGCTTACTCCTTTGTCTTTCTTACACAGGACGACAAGCTCGTCGCCGAGACATTTGCCCTTGATTTGATCGAAGCCACGTACGAAGGAGAGGTGTACCCTGGTGAAGTTTTGGCGGTGGACCATAGCGGAGAAGTTCAATCTCTCTGCCTGACGTCTCATCCACAGCCGAAGCAGTGCATATTTGAGCACATATACTTTGCACAGCCCAATTCTGTTGTGTTTGGGAGATCCGTGTACGAATCACGCAAGAAATTCGGTGAGATTCTGACCACTGAGAGCCCCGTGGATTGCGATGTTGTGATAGCGGTTCCAGATTCCGGCGTGGTGGCTGCGATTAGATATGTGGAAAAAGCGGGTGTCCCTTTCCAGCAAGGGAGGCTGGGGCTAAGGAGGTTCCATATGAGGATTGCGTGTCCTCCGATCATTGGTTCGTGTTATTATGGAGTTGACCCTCCCACCTCCGAGAAGCTCATATCCAATAGGATGAGTGGTGTGGATCAGATTAGGGACTTCATTGGATGCGACTCGCTTGCTTTTCTTCCCCTTGATAGCCTCACCAGCTCCTTCGGACCTCACTCTTCAAATTTCTGTTATGCTTGCTTCTCCGGGGTCTACCCTCTGCCTCTGGATCCCAATGCCTTCGGTAGTGGGATTCAGCACGCTTCCCTTCAACCGCACCCAAATTACCAAGAGCCCAACATTGTTACTCTTTGA 1344 0.5305 MAASLSKPSSIIFSPPNSCFHTKPLQSSIFFLRHAQPSSFSLSCNNDGENTPREECGFVGIHGDPEASRLCYLALHALQHRGQEGAGIVALNNNHLQSTTGIGLVSEVFNESKLNQLPGISAIGHDRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLINYCSLRAKLEDKGSIFNTNSDTELVLHLIATSKHRPFLLRIVDACENLHGAYSFVFLTQDDKLVAETFALDLIEATYEGEVYPGEVLAVDHSGEVQSLCLTSHPQPKQCIFEHIYFAQPNSVVFGRSVYESRKKFGEILTTESPVDCDVVIAVPDSGVVAAIRYVEKAGVPFQQGRLGLRRFHMRIACPPIIGSCYYGVDPPTSEKLISNRMSGVDQIRDFIGCDSLAFLPLDSLTSSFGPHSSNFCYACFSGVYPLPLDPNAFGSGIQHASLQPHPNYQEPNIVTL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0346 447 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 338 417 - -
Amo08g0346 447 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 224 336 - -
Amo08g0346 447 SUPERFAMILY PRTase-like 269 422 IPR029057 -
Amo08g0346 447 PIRSF Pur1 223 342 IPR005854 GO:0004044|GO:0009113
Amo08g0346 447 PIRSF Pur1 52 227 IPR005854 GO:0004044|GO:0009113
Amo08g0346 447 PIRSF Pur1 336 429 IPR005854 GO:0004044|GO:0009113
Amo08g0346 447 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 40 225 - -
Amo08g0346 447 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 224 336 - -
Amo08g0346 447 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 56 304 IPR017932 -
Amo08g0346 447 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 40 225 - -
Amo08g0346 447 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 338 417 - -
Amo08g0346 447 Pfam Glutamine amidotransferase domain 121 222 - -
Amo08g0346 447 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 56 319 IPR029055 -
Amo08g0346 447 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 56 256 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0346 Amo-Chr8 6801766 6803366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0346 32 417 PRT Gene Family AT4G34740 58.811 6.83e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0346 K00764 - gmx:100801720 541.962