Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0341 ATGACAAGCCCAACTGTATCGAAGAATCGCAACGGCCTTCGTTCCATGTTACAAGTGAATTTGCAGCAGGCATATCATCATGACATGATGAAAAATAGTAATGATGAATCCTCTAACAGTAACAGCAGTCCCTACTACAAAGGCCTCACCGATCAATCCCTTGCCATCTTTGCACCCTCATCTCCACCTCATCATCATCATGATCATGCTACCATTCCTTGCTACCCTATTACTCCTCTTCCTCTCCCCAGCCTTCATCCTCACCTCTCATCATCCGGATCTGGGGCGCAGGGGCAAAGTCCGTACTACAAGGGTCTTACCGATTATTCCCTTGTTATTGGTTCTTGGAGCAGCCACAATCCTACTTCCACCAATCCATCATACCACCCTCAGTCTAGCCCTTACTACAGGGGCCTCACGGATTTCTCCCTTGTCCTTCACGATCATCCTCAGGAGACAGAGATTGATCCCAATGATGGTGAGGTTGAGGGCGACTTAGTACTGATCCAAGAAGATCATAAGACAGTATTAACAGAAGAGGTTAATGCCAAAGGGGTTCTATTAGTGGAGATGGAGGTTATTGATGCCACCCATGAAGAAGAGAAACCATTGAGGGAGAGAGTGACAGTAACACCGGATGATGATGATTTACAAGACACAAGGACGAAGGAGGATATTTATCATCATCATCAGGAAATAACATCACTACAAGAGGACCCAAATGCATACCAATATGAATGGGCAACCAAACACCAGCCCCAAACCTTGGAAGAATTCATCTGCAACTCTGATAAAGCACTCCAACTCCAAGCATTAGTAAGAGAGGGTTGTGGCTGTAATCATTTTATATTTGAGGGACCCCCCAACGTAGGAAAGAGATCCATGATCCGGGCTATGCTTCGCGACCTATTCGGCCCTCAGAGACTGCAGGTCATAGAAGAATCCAGAGACTTCACCTTGAAGGGAGAAATGGTTGACAAGCTGCAAGTGCAGATAAAAAAATCACTGCATCATGTGGAGATCAATGTCTCAGAGACAAAGGGGTACGAAAAACACGTAATTGCGGATTTATTCAACGGAACATATGCCAAGACGATAAATAACTCCCTGCCTTGTAGCCCAGATAACTGCCAAGGTGCGCTCTCTGACTTATATATATGTTGTGATGGTTACTTGAAAGGGAGTTGTATTTGA 1194 0.4514 MTSPTVSKNRNGLRSMLQVNLQQAYHHDMMKNSNDESSNSNSSPYYKGLTDQSLAIFAPSSPPHHHHDHATIPCYPITPLPLPSLHPHLSSSGSGAQGQSPYYKGLTDYSLVIGSWSSHNPTSTNPSYHPQSSPYYRGLTDFSLVLHDHPQETEIDPNDGEVEGDLVLIQEDHKTVLTEEVNAKGVLLVEMEVIDATHEEEKPLRERVTVTPDDDDLQDTRTKEDIYHHHQEITSLQEDPNAYQYEWATKHQPQTLEEFICNSDKALQLQALVREGCGCNHFIFEGPPNVGKRSMIRAMLRDLFGPQRLQVIEESRDFTLKGEMVDKLQVQIKKSLHHVEINVSETKGYEKHVIADLFNGTYAKTINNSLPCSPDNCQGALSDLYICCDGYLKGSCI* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0341 397 PANTHER OS10G0574500 PROTEIN 37 365 - -
Amo08g0341 397 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 37 365 - -
Amo08g0341 397 Gene3D - 245 377 IPR027417 -
Amo08g0341 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0341 Amo-Chr8 6482392 6484433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0341 247 359 Core DNA Replication Machinery Family AT5G27740 28.070 2.56e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0341 K10756 - aip:110268739 478.789