Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0291 ATGAATTTGTTTTTTATTCTTTGTCCGTTGTTGTTGTTCTTCCCCTTTTTGGGAGTATCTGCTGCTGCAAATGTCTCGTCCTCAAGACCTTCTGTCGCGAACATTGGGGCGATCTTCACCTTCAATTCCACAATTGGGAGAGTGGCTAAAATTGCCATGGAGCAAGCAGTGAAGGATGTCAATGCCAACACCAGCATCCTTCATGGAACAAAGCTTGTCCTCCAAATGCAAGATTCCAATTGTAGTGGTTTCATGGGCATGGTTCAATCTTTGCGGTTCATGGAGACTGATGTAGCTGCTATAATAGGTCCCCAATCTTCTGTTGTAGCTCACATCATATCCCATGTTGCGAATGAGCTTCGAGTTCCTCTGGTGTCGTTTGCTGCCACAGATCCTACTCTTACCTCCCTGCAGTTCCCATTCTTTGTGAGGACAACACAGAGTGATTTGTATCAAATGACTGCAGTTGCGGAGATCATAGACTATTATGGTTGGAAGGAGGTGATTGCCATCTATTTAGATGATGATTATGGACGAAATGGTGTTTCTGTGTTGGATGATCAGCTGGCTGCTCGGCGCTGCAAAATATCCTACAAGGCTGCAATCAAATCTGGATCAGTTGACCGGGGAGAGATCACGAATTTGCTTGTGCAAGTGGCTCTGATGCAATCTCGGATCATTGTTCTTCATACAAATCCTGATTCTGGATTTATGGTCTTCAATGTGGCGCATTATCTTGGGATGACAACCAATGGCTTTGTCTGGATAGCCACGGATTGGCTGTCATCTGTCTTGGATTCTACTTCTCTACCTTCAGAAACAATGGATATTCTTCAAGGAGTACTTGTTTTGCGCCAACATACACCTGATTCTGATAGAAAGAAATCATTTATCTCTACATGGAACAAGTTAACTGGTGGCTCTTTGGGGCTACATTCCTATGGTCTCTATGCTTATGATTCTGTCTTTCTGTTAGCGCACGCTCTCGATGCATTCTTTAGTCAGGGTGGGATTGTTTCGTGTACCAACTACACTAGTTTGCGCGATGATAAGCCTGGTGGTCTTAACCTTGATGCTATGAGCATTTTTGACAATGGAACACTTCTGCTGAAGAACATAGAGCAGAGTGATTTTCTTGGATTAACAGGTCATGTGAAATTTGCATCAGACAGATGCCTTGTTCGTCCTGCATATGATGTTATCAATGTGGTTGGAACTGGCATTCATCGGGTAGGTTACTGGTCGAACTATTCTGGTCTCTCAATTGTGCCTCCAGAGACATTGTATGCTAAGCCGGCTAATAAATCAAGTGCAAACCAGCACCTTCATAGTGTCATATGGCCTGGAGATACATTATCAAAACCCCGTGGATGGGTTTTCCCAAATAATGGAAGGCAATTGAGAATTGGTGTGCCTGTTCGAGTTGGTTTCCGCGAATTTGTTTCGCCGGTGCAGGGAACTGATATGTTTAAAGGTTTCTCTATTGATGTATTCACTGCAGCTGTGAACTTGTTACCATATGCTGTTCCATACCACTTTGTCCCATTTGGAAGTGGCCGCGAGAATCCAAGCTACACACAACTTGTCAATTTAATTGCCACAGGTTACTTTGATGGTGCTGTTGGTGACATTGCCATCATCACGAATCGGACAAAGATTGTAGATTTCACACAGCCATATGCTGCATCTGGACTAGTTGTGGTGGCCCCTTTTAAGAAAATCAATTCTGGAGGATGGTCTTTCCTTCGGCCATTCACACCACTTATGTGGACTGTGACTGCTTGTTTCTTCTTTTTCGTTGGAATAGTTGTATGGATTCTGGAACACAGGATCAATGATGAGTTCAGAGGCCCACCAAAACAACAATTCATAACAATTTTATGGTTTAGCCTTTCAACTCTCTTCTTTTCCCATAGAGAGAATACCATGAGCACTCTCGGCAGATTGGTGGTTCTGATCTGGCTGTTTGTAGTGTTGATCATAAACTCCAGCTACACTGCAAGTTTAACATCCATACTCACTGTGCAGCAGCTATCTTCCCCTATCAGTGGAATAGATAGCTTAAAGAATAGTAATGAACACATAGGATTCCAAGTGGGTTCATTCGCGGAGCACTATTTGGTTGAGGACATCGGGATATCCGAAAATAGACTCGTTCGCCTAGGATCTCCAGAAGCATATGCTAAGGCACTCCAACTTGGTTCTAAGAATGGAGGTGTTGGTGCCATTGTTGATGAAAGACCATACATTGAAATCTTCTTATCAACACAATGCACATTCAAAATTGTAGGCCAGGAGTTCACCCGAAGTGGCTGGGGTTTTGCATTCCCTCGCGACTCCCCATTAGCCGTGGATTTGTCAACTGCTATTCTACAACTTTCGGAGACAGGGGATCTGCAGCGGATTCATGATAAGTGGATGACAAGAAGCAGCTGTAGTTTAGATAATGCCGAGATTGATTCGGATAGGCTTCAGTTGAAAAGCTTCTGGGGACTGTTCCTCCTTTGTGGCTTGGCTTGCTTCATAGCTCTTGTCATACATTTTGTGCAAATTATGGTGCGGATGTGGCATGCACCTCCTCCTGAAGCTGCATCTAATGGTAGCTCCATTTCTGGTCGTTTTCAAAGGTTTCTGTCACTGATTGATGAGAAGGAAGAGTCACCAAGGAGTGAGAGAAGAAAGAGGAATGGAGATGAAGGATCTGCTGCTGATCATCAACTTGATGGGAGGCACACAAAGAGGATACAGTTTGATTTAACACCCAACTCAAACAGATAA 2778 0.4374 MNLFFILCPLLLFFPFLGVSAAANVSSSRPSVANIGAIFTFNSTIGRVAKIAMEQAVKDVNANTSILHGTKLVLQMQDSNCSGFMGMVQSLRFMETDVAAIIGPQSSVVAHIISHVANELRVPLVSFAATDPTLTSLQFPFFVRTTQSDLYQMTAVAEIIDYYGWKEVIAIYLDDDYGRNGVSVLDDQLAARRCKISYKAAIKSGSVDRGEITNLLVQVALMQSRIIVLHTNPDSGFMVFNVAHYLGMTTNGFVWIATDWLSSVLDSTSLPSETMDILQGVLVLRQHTPDSDRKKSFISTWNKLTGGSLGLHSYGLYAYDSVFLLAHALDAFFSQGGIVSCTNYTSLRDDKPGGLNLDAMSIFDNGTLLLKNIEQSDFLGLTGHVKFASDRCLVRPAYDVINVVGTGIHRVGYWSNYSGLSIVPPETLYAKPANKSSANQHLHSVIWPGDTLSKPRGWVFPNNGRQLRIGVPVRVGFREFVSPVQGTDMFKGFSIDVFTAAVNLLPYAVPYHFVPFGSGRENPSYTQLVNLIATGYFDGAVGDIAIITNRTKIVDFTQPYAASGLVVVAPFKKINSGGWSFLRPFTPLMWTVTACFFFFVGIVVWILEHRINDEFRGPPKQQFITILWFSLSTLFFSHRENTMSTLGRLVVLIWLFVVLIINSSYTASLTSILTVQQLSSPISGIDSLKNSNEHIGFQVGSFAEHYLVEDIGISENRLVRLGSPEAYAKALQLGSKNGGVGAIVDERPYIEIFLSTQCTFKIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSETGDLQRIHDKWMTRSSCSLDNAEIDSDRLQLKSFWGLFLLCGLACFIALVIHFVQIMVRMWHAPPPEAASNGSSISGRFQRFLSLIDEKEESPRSERRKRNGDEGSAADHQLDGRHTKRIQFDLTPNSNR* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0291 925 Gene3D - 462 575 - -
Amo08g0291 925 Gene3D - 576 710 - -
Amo08g0291 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 913 - -
Amo08g0291 925 CDD GluR_Plant 465 806 - -
Amo08g0291 925 SMART GluR_14 468 809 IPR001320 GO:0015276|GO:0016020
Amo08g0291 925 SUPERFAMILY Periplasmic binding protein-like I 28 459 IPR028082 -
Amo08g0291 925 Gene3D - 51 395 - -
Amo08g0291 925 PANTHER GLUTAMATE RECEPTOR 3.3 20 913 - -
Amo08g0291 925 MobiDBLite consensus disorder prediction 882 915 - -
Amo08g0291 925 MobiDBLite consensus disorder prediction 882 925 - -
Amo08g0291 925 Pfam Receptor family ligand binding region 50 405 IPR001828 -
Amo08g0291 925 PIRSF IGluLR_plant 1 924 IPR017103 -
Amo08g0291 925 Gene3D - 148 420 - -
Amo08g0291 925 CDD PBP1_GABAb_receptor_plant 34 424 IPR044440 -
Amo08g0291 925 Gene3D - 754 814 - -
Amo08g0291 925 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
Amo08g0291 925 Pfam Bacterial extracellular solute-binding proteins, family 3 474 808 IPR001638 -
Amo08g0291 925 SUPERFAMILY Periplasmic binding protein-like II 443 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0291 Amo-Chr8 5232006 5236337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0291 11 904 Ion Channels AT1G42540 63.797 0.0 1222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0291 K05387 - gmx:102661260 1475.3