Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0270 ATGGCTTCGCTTTCTCTCAACATGGCACCGGATAAGGCTCCATTGAAAGATGGTTCAAGCATCAATCAGCTTCTTGGTATTAAAGGAGCTGCTCAAGATTCAAATAAATGGAAGATTCAAGTTCAATTTACAAAATTTGTCACTTGGCCTCCGTTGGTTTGGGGTGTAGTTTGTGGTGCCGCTGCTTCTGGAAATTTCCATTGGACTATTGAGGATGTTGCTAAATCAATTGCGGGCATGTTGATGTCTGGCCCGTTTCTAACAGGATATACTCGGACTATAAATGATTGGTATGACCGAGAAATCCGAATTCCTTCTGGGGTTATATCTGAGAACGAGGTTATCACTCAAATATGGGTGCTGCTACTAGGAGGTCTTGGCTTGGCAGGTCTATTAGACGTATGGGAGTCTTGGGTTGAGGTTGGTGTGTTAAGAAATAACAACATAGCCCCTTGGGTTGTAAAGTGGCGATGTCCAAAGCAAAGCCTATCTCCCAACCCCGATCCCGGATTTGGTTGTCCAAAGAAAAGCCTAGCTCCCAATGCTGATGCCGGTTTTGGATTTCCAAAGAAAACCATACCTCCCAAGAAAAGCCTTCCTCCTAACCCTGATACTAGTTTCCAGAAAATGGTCCTTTATTTAGAGTCTATAGGTCTAGACTCTTTCTCAGTTATCGAAAATCATCCGAAGTTGATCACTGCCTCCCTCGATGACATTAAATCTACAGTGGAATACATTATGTCCATGGACTTCACCACGATCGAGTTTCGACGCATAGTTGGCATGTGCCCGGATGTTCTGACCACCCACGTCTCGGACATCATACCCGTCTTTACCTTCCTTCTCCGCGAGGCTCATGTAAAAGGCTCGGATATTAAAAGGGTCATACATCGTCGCCCGAGGTTGCTTGTTTGCAGTGTCAATAACCAACTCCGTCCTACACTTTACTACCTCCAAAGTATTGGCATAGAAGAGGTAAGTAGGCACACTGATTTGCTATCATGTAGTGTCCAAGAAAAGCTTATACCCCGAATAGATTACTTCGAGAATATCGGGTTTTCTCGACGCGATGCAACTACCATGTTCCGAAGATTTCCTCCACTGTTTTGTTACAGTATTAAGAATAATCTGGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAGGAGTTTCCACAGTATTTCTCATTTAGCTTAGAGAACAGAATTAAGCCGAGGCATAAACGCTGCGTAGAAATGGGGGTGTGTTTCCCTCTCCCTGTGTTGTTAAAGATGACCGAAATGAGCTTTCAAAATAGGTTAGATCTATGTGTAAATTCCTCAACACCCTTGAAAAAATCTCCTCTCTGGTGTAATGCTTGTGATATTCAAGTATAG 1398 0.4349 MASLSLNMAPDKAPLKDGSSINQLLGIKGAAQDSNKWKIQVQFTKFVTWPPLVWGVVCGAAASGNFHWTIEDVAKSIAGMLMSGPFLTGYTRTINDWYDREIRIPSGVISENEVITQIWVLLLGGLGLAGLLDVWESWVEVGVLRNNNIAPWVVKWRCPKQSLSPNPDPGFGCPKKSLAPNADAGFGFPKKTIPPKKSLPPNPDTSFQKMVLYLESIGLDSFSVIENHPKLITASLDDIKSTVEYIMSMDFTTIEFRRIVGMCPDVLTTHVSDIIPVFTFLLREAHVKGSDIKRVIHRRPRLLVCSVNNQLRPTLYYLQSIGIEEVSRHTDLLSCSVQEKLIPRIDYFENIGFSRRDATTMFRRFPPLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCVEMGVCFPLPVLLKMTEMSFQNRLDLCVNSSTPLKKSPLWCNACDIQV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0270 465 PANTHER OS03G0360600 PROTEIN 207 451 - -
Amo08g0270 465 Pfam mTERF 329 438 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 Pfam mTERF 208 284 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 PANTHER CGI-12 PROTEIN-RELATED 207 451 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 SMART mt_12 325 354 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 SMART mt_12 392 423 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 SMART mt_12 359 391 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Amo08g0270 465 Gene3D Transcription termination factor 3, mitochondrial 272 444 IPR038538 -
Amo08g0270 465 Gene3D UbiA prenyltransferase 41 147 IPR044878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0270 Amo-Chr8 4871518 4874916 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo08g0270 mTERF 3.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0270 K15032 - ahf:112704905 890.952