Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0241 ATGAGAGAGAGAGAGAGAGTAAATAGAGGGAAAGAGAAAATGCCGCTCAAGTTAGGAGGAGGAGCTGCTGCTTTTGGCGCCTTCTTAGTCCTATGTGTTGGTTTTTCTCTCTTTGCAGTTACCTTGGCTGAAGACCCGTACAGGTTCTTCAACTGGAACGTCACTTATGGCGATATTTACCCCCTTGGAGTTCGCCAAAGGGGAATACTTATCAATGGGCAATTTCCCGGTCCAGACATTCATTCAGTTACCAATGACAATCTCATCATCAATGTCTTCAACAGCTTGGATGAGCCTTTTCTCCTTTCCTGGAATGGGATCCAGCAGAGAAGGAACTCATTTGAAGATGGAGTGTTGGGAACAACATGCCCAATCCCACCAGGGAGGAACTTCACATACATTCTACAAGTGAAGGATCAGATTGGAAGCTTCTATTACTTCCCATCTCTTAATTTTCATAAAGCAGCTGGTGGTTTTGGAGGAATTAGGATCCTAAGCAGGCCTAGAATTCCAGTTCCATTCCCTGATCCAGATGGTGATTACACTGTTCTCATTGGAGATTGGTACAAATCCAACCACACTACGTTGAAAGCTCATCTTGATAGAGGTAAGAAGTTGCCTTTACCTGATGGCATTCTCATAAATGGTCGTGGGCCTAACGGAGCATATCTCAACGTCGAACAAGGAAAGACTTACAGGCTTAGAATATCAAACGTGGGGTTGCAACATTCGCTTAACTTTCGCATACAGAACCACAAATTGAAGCTGGTAGAAGTGGAAGGAACACACAGCCTACAAACCACATACTCCTCCCTTGACGTTCATGTGGGACAATCTTATTCGGTTCTAGTTACTGCAGACCAACCAGCACATGACTATTACATTGTTGTTTCCACTCGATTCAACTACAAGATCCTCACCACCACTGGAGTTCTTCACTATAGCAATTCTGGGGGCCAAGTTTCCGGTCCAATCCCTGGTGGACCTACCATCCAAATTGATTGGTCTTTGAACCAGGCCCGCTCCATAAGGACTAACCTTACGGCAAGTGGACCAAGGCCGAACCCTCAAGGATCATACCATTACGGTTTGATAAACACAACCAAGACCATAATTCTGGCAAGTTCAGCTGGTCAAGTGAACCGCAAGCAGAGATATGCAATCAACAGCGTGTCCTATGTTGCCCCAGACACTCCTCTTAAACTCGCCGACTACTTCAAGATCTCGGGTGTTTTCCGTGCTGGAAGCATCTCTGACAGACCCTATGGTGGTGGCATATACCTTGATACCTCTGTATTGCAAGCTGATTATAGATCCTTCGTTGAGATTGTCTTCCAAAACAAYGAGAATATTGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTRGTTGGTATGGATGGAGGACAGTGGACAACTGCTAGCAGGAACAGTTACAATCTTAGGGATGCAATTGCACGTTGCACAACACAGGTATATCCTTATTCATGGACGGCTATATATGTTGCACTTGACAATGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATATCTTGGTCAACAGTTTTACTTGCGCGTTTACACAGATTCAACCTCAATTAGGGACGAATTTCCAGTTCCAAAGAATGCACTTCTTTGTGGTAAGGCAAGTGGAAGACACACACGTCCCCTTTGA 1689 0.4476 MRERERVNRGKEKMPLKLGGGAAAFGAFLVLCVGFSLFAVTLAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSFEDGVLGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLNFHKAAGGFGGIRILSRPRIPVPFPDPDGDYTVLIGDWYKSNHTTLKAHLDRGKKLPLPDGILINGRGPNGAYLNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHSLQTTYSSLDVHVGQSYSVLVTADQPAHDYYIVVSTRFNYKILTTTGVLHYSNSGGQVSGPIPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILASSAGQVNRKQRYAINSVSYVAPDTPLKLADYFKISGVFRAGSISDRPYGGGIYLDTSVLQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTASRNSYNLRDAIARCTTQVYPYSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTDSTSIRDEFPVPKNALLCGKASGRHTRPL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0241 562 Gene3D - 363 558 IPR008972 -
Amo08g0241 562 Pfam Multicopper oxidase 180 316 IPR001117 -
Amo08g0241 562 Gene3D - 177 353 IPR008972 -
Amo08g0241 562 CDD CuRO_3_AAO_like_1 396 516 IPR034275 GO:0005507
Amo08g0241 562 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 26 555 - -
Amo08g0241 562 PANTHER MULTI-COPPER OXIDASE 26 555 IPR045087 -
Amo08g0241 562 Pfam Multicopper oxidase 54 167 IPR011707 GO:0005507
Amo08g0241 562 SUPERFAMILY Cupredoxins 174 354 IPR008972 -
Amo08g0241 562 Gene3D - 47 168 IPR008972 -
Amo08g0241 562 SUPERFAMILY Cupredoxins 364 553 IPR008972 -
Amo08g0241 562 Pfam Multicopper oxidase 398 534 IPR011706 GO:0005507|GO:0016491
Amo08g0241 562 SUPERFAMILY Cupredoxins 41 194 IPR008972 -
Amo08g0241 562 CDD CuRO_1_AAO_like_1 49 164 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0241 Amo-Chr8 4016713 4021983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0241 - - aip:107609742 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0241 08 4016713 4021983 Amo17g2831 17 130275827 130276246 hybridization
Amo06g0951 06 13022753 13026333 Amo08g0241 08 4016713 4021983 PCT
Amo08g0241 08 4016713 4021983 Amo06g0951 06 13022753 13026333 PCT