Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0238 ATGCTAAGAGTTTCTTCGAAACTTGTGCCGCTTCTTCTTCAGTCAGTTACTTCAAGTCACACTCACACGCACCTCATTTCTTCTTATTCTACTTCACGTCTCTTCCTCTCTTATTCTCACCTTTTTCCTCGGAGACCGATGGCCTCTCTCTCCGCCCTACCACACCGTCTCCAATATCCTACTGCTCGCAGAGACGACTCCATCGTTGAAGACTACCACGGCGTCAAGGTTGCCGATCCTTACCGATGGCTCGAAGATCCAGATGCGGAAGAAGTGAAGGAGTTTGTAGAGAAACAGGTGCAATTGACGAACTCGGTACTTCAGCAATGCGAAACTAGATCCAAACTTAGTGAAAAGATCACGAAGCTTTTTGATCATCCTCGTTATCATGCTCCGTTTAGGCGAGGTGATAAGTACTTTTACTTCCACAACTCAGGGCTTCAGCCTCAAGACACACTCTATGTGCAGGATAGCTTGGAGGGTRAACCTGAGGTTTTGCTTGATCCTAATGCGCTCAGCGAAGATGGAACCATCTCGTTGAACACGCTATCAATCAGTGAAGATGCTAAGTATTTGGCTTACGGACTTAGTTCAAGTGGTAGTGATTGGGTGACTATAAAAGTAATGCGTATTGCAGATAAGAATGYTGAGCCTGACACTTTGTCATGGGTCAAGTTTTCCTCTATTAGTTGGACACATGATAGCAAAGGTTTCTTTTATAGCCGATATCCAGCACCTAAGGATGGAGAAGTAGTAGATGCTGGGACTGAGACGAATTCTAATCTTTACCATGAGCTCTATTATCATTTCTTGGGTACAGATCAATCAGAAGATATTTTGTGTTGGAGAGATCCTGAAAACCCTAAATATTCATTTGGAGGAAGTGTCACTGATGATGGGAAGTATGTTCTCCTTTATATTTCAGAAGGCTGTGATCCAGTTAACAAACTTTACTACTTTGACATGTCTGAACTTCCCAATGGGATGGAAAGTTTTCGAAATAAAAGTACTCTGCTTCCATTTGTCAAGCTCATTGATAATTTTGATGCACAGTATCATGACATTGCGAATGATGGCACTCTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAACTAGTAAGGGTAGATTTGAGAGAACCAACTGTGTGGTCTGAGGTTCTCCAAGAGTCTGAAAATGATGTACTTGAGTCAGCTTGTGCTGTGAATGGTAATCAACTGATAGTGAGTTATTTGAGTGATGTGAAGTATATTCTTCAAGTAAGAGACCTAGAAACAGGCTTGTTGCTACATCAATTACCAATTGATATTGGCACTGTTGAYGAAGTTTCTGCAAGGCGTAAAGATAGTGTGGTTTTCATAAGCTTTACAAGCTTCCTAACGCCAAGAATCATATATCAGTGTGACCTTAGAACAAATATACCTGATATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGATCGCTCTGAGTTTCAGGTCAAGCAGGTTTTTGTTACCAGTAAAGATGGGACAAAGATCCCAATATTCATTGTTGCCAAAAAGGATATTCGTTTGGATGGATCGCACCCKTGTTTGCTATATGGATATGGTGGTTTTAACATAAGTCTCACMCCATMTTTCGCTGTTAGTCGTATAGTACTCACTAGACATTTAGGTACTGTTTTTTGCATTGCAAATATTCGTGGAGGTGGAGAATACGGGGAGGAATGGCATAAAGCAGGATCCCTTGCAAATAAGCAGAATTGCTTTGATGACTTCATCTCTGCAGCTGAGTATCTTGTGTCTACTGGTTATACCCAACCCCGAAAGTTATGCATTGAAGGTGGGAGTAATGGTGGTCTTCTTATTGGGGCTTGTATAAACCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGATATGCTAAGGTTCCACAAATTTACCATAGGCCATGCTTGGACCACAGATTATGGTTGTTCAGACAAGGAGAAAGAGTTTCATTGGCTAATCAAGTACTCACCATTGCATAATGTGCGGCGGCCATGGGAACAGCAGCCTGATAAGTCAATTCAATACCCATCGACCATGCTGTTGACTGCTGATCATGATGATCGTGTTGTGCCATTGCACTCATTGAAGCTATTGGCGACCATGCAGTATGTCCTGTGTACTAGCTTGGAGAATAGTCCGCAGACGAACCCGATAATTGGTCGCATTGACTGCAAGTCTGGACATGGAGCCGGTCGGCCAACACAGAAAATGATAGATGAAGCTGCTGATCGGTACAGCTTCATGGCAAAAATGTTAGACGCGCAATGGATTGATTAG 2334 0.4203 MLRVSSKLVPLLLQSVTSSHTHTHLISSYSTSRLFLSYSHLFPRRPMASLSALPHRLQYPTARRDDSIVEDYHGVKVADPYRWLEDPDAEEVKEFVEKQVQLTNSVLQQCETRSKLSEKITKLFDHPRYHAPFRRGDKYFYFHNSGLQPQDTLYVQDSLEGXPEVLLDPNALSEDGTISLNTLSISEDAKYLAYGLSSSGSDWVTIKVMRIADKNXEPDTLSWVKFSSISWTHDSKGFFYSRYPAPKDGEVVDAGTETNSNLYHELYYHFLGTDQSEDILCWRDPENPKYSFGGSVTDDGKYVLLYISEGCDPVNKLYYFDMSELPNGMESFRNKSTLLPFVKLIDNFDAQYHDIANDGTLFTFLTNKDAPKYKLVRVDLREPTVWSEVLQESENDVLESACAVNGNQLIVSYLSDVKYILQVRDLETGLLLHQLPIDIGTVDEVSARRKDSVVFISFTSFLTPRIIYQCDLRTNIPDMKIFREIVVPGFDRSEFQVKQVFVTSKDGTKIPIFIVAKKDIRLDGSHPCLLYGYGGFNISLTPXFAVSRIVLTRHLGTVFCIANIRGGGEYGEEWHKAGSLANKQNCFDDFISAAEYLVSTGYTQPRKLCIEGGSNGGLLIGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDKEKEFHWLIKYSPLHNVRRPWEQQPDKSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIDCKSGHGAGRPTQKMIDEAADRYSFMAKMLDAQWID* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0238 777 Gene3D - 127 486 - -
Amo08g0238 777 SUPERFAMILY Peptidase/esterase 'gauge' domain 55 478 - -
Amo08g0238 777 PANTHER PROLYL ENDOPEPTIDASE 43 777 - -
Amo08g0238 777 ProSitePatterns Prolyl endopeptidase family serine active site. 589 619 IPR002471 GO:0004252|GO:0006508
Amo08g0238 777 Gene3D alpha/beta hydrolase 68 767 IPR029058 -
Amo08g0238 777 Pfam Prolyl oligopeptidase family 544 772 IPR001375 GO:0006508|GO:0008236
Amo08g0238 777 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 43 777 - -
Amo08g0238 777 SUPERFAMILY alpha/beta-Hydrolases 495 721 IPR029058 -
Amo08g0238 777 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 60 475 IPR023302 GO:0004252
Amo08g0238 777 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 527 545 IPR002470 GO:0004252|GO:0006508
Amo08g0238 777 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 582 601 IPR002470 GO:0004252|GO:0006508
Amo08g0238 777 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 554 578 IPR002470 GO:0004252|GO:0006508
Amo08g0238 777 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 612 632 IPR002470 GO:0004252|GO:0006508
Amo08g0238 777 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 694 716 IPR002470 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0238 Amo-Chr8 3974799 3979581 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0238 K01322 - gmx:100776544 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0950 06 13019623 13022575 Amo08g0238 08 3974799 3979581 PCT
Amo08g0238 08 3974799 3979581 Amo06g0950 06 13019623 13022575 PCT