Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0215 ATGAAAGAGAATAACAACTATCTAGCTTCCTTGCCGCTACTATTCTGCTGCTGTGTTCTCTTGTGCCTGGCAGAGTCATCAGCAGATAACGACAATAACAATAATAATAATGAAGTTTATATAGTATATATGGGAGCCGCGAATTCAACAAATGCATCCCTTCGTAATGATCATGCTCGTGTTCTCAACTTGGTCTTAAGAAGGAATGAGAAGGCTCTAGTACAGAACTACAAGCATGGATTCTCGGGTTTTGCGGCTCATCTATCAAAGGAAGAAGCGGAGTCAATAGCTCAGAAACCAGGAGTGGTATCTGTGTTCCCTGATCCCATTCTGAAGCTTCACACAACACGTTCATGGGAGTTCCTCAAGTATCAAACTCAAGTCAAAATCGATTCTCTCCCAACCGCCGCAAATTCTCAGTCATCAGACACCATCATTGGCATCTTAGACACAGGTATATGGCCAGAGGCGGAAAGTTTCGTGGACACGGGCATGGATCCTGTTCCATCCCGTTGGAAGGGTACCTGCATGAAATCGACAGATTTCAATTCATCCAACTGCAACAGGAAGATAATTGGAGCGAGGTATTATGCAGACCCTAATGCGGGTAATGACGGGGATAACACAGCAAGGGATTCCAATGGCCATGGGACTCACGTCTCGTCCACGGCGGCGGGTGTCAACGTCGCAAATGTATCCTTCTATGGTCTGGCGGAGGGGACTGCCGTCGGTGGCTCCCCACAATCCCGATTGGCAATGTACAGAGTGTGCACCAACTTCGGGTGCCGGGGCTCCGCCATCCTCGCCGGCTTTGACGATGCAATCAACGACGGCGTCGACGTACTGTCTCTCTCACTTGGATCGCCGTCAGTGCTCCGACCAGACCTCACATCCGATCCCATTGCCATCGGATCGTTCCACGCGGTGGAGCGCGGGATCGTGGTGGTTTGCGCCGCCGGAAATGATGGGCCGTCGTCGAAAACTGTCGTGAACGACGCGCCATGGATTTTAACGGTTGCAGCCACCACCATCGATCGGGAGTTTGAGTCTAACCTTGTGTTGGGTGACAACAAAGTGGTCCAGGGAAATGCTATAAATTTCTCTCCGCTTTCAAAGACACCGGATTTTCCATTCATAAATGGCGAGTCTGCCAAGACAAGCAGTGCCACGGTTTCTGACGCAAGGCAATGCCACCCAAATGCGTTAGATGGAACAAAGGTGAAAGGGAAGATCGTGTTTTGCGATGGGCAAAACGATACTTATTCAACTACCGAAAAGGCTTTCCAAGTGTCACAAGCGGGAGGATTAGGCATGGTTCATGTCACTGACCAAGGTGGATCTGTGACACAATTTTTTGGGAACTTTCCAGCAACCACTGTAAGTCCAAAAGATGGCGCCCCAATATTTCAGTATCTCAATTCCACTAGCAAACCAATGGCAACAATTCTGCCAACAGTTTCAGTCATTAAGTATAAGCCTGCACCCGTGGTGGGATACTTCTCTGCAAGAGGCCCTGCAACACTTTCAAGTAATATTCTAAAGCCTGATGTTGCAGCACCGGGAGTTAACATTCTTGCGGCATGGCTTGGCAACGGTGCAGACGATGATGTCCCACAAGGACAAAAGCCCTCAGCATACAAAGTCCTTTCAGGGACTTCCATGGCATGCCCTCATGTTTCAGGCCTCGCAGCCAACGTTAAATCTCGTAACCCCACTTGGACTCCCTCTGCTATTAAGTCAGCCATAATGACTTCAGCAATTCAGAACAACAATATGAAGGCTTTATTGACAATGGATTCAGGGTCAGTAGCCACACCTTATGACTATGGAGCAGGGGAAATTACGACATCTGAACCGTTGCAACCAGGGCTAGTTTACGAAACCACCACCATTGACTACTTGAACTTCTTGTGTTACATTGGGCTTAACGTGACCACCATTAAAATCATCTCCAAAACTGTCCCTGAAAGCTTCAATTGCCCAAAGGATTTGAGCCCTTATCAAATTTCCAACATCAATTACCCTTCCATAGTAGTCTCCAACCTCAAAGGTGGAGGAGCAGTGAATGTGAGTAGAACAGTGACAAATGTTGGTGAAGACGATGAAACAACCTACTCCTCTGTTGTGGATGCTCCCAGTGGGGTAAATGTTAAGTTAATTCCAGAAAAACTTGAATTCACGGAAAGTAGTAAAACACTAAGCTACCAAGTTAGCTTCAGCTTGAGTTCAAGTTCGAAGTCGTTGAATGGAGATCAGTTTGGATCCATTACTTGGAGTGATGGCAAATATAGTGTTCAAAGTCCATTTGTATTGACTAATTAA 2322 0.4707 MKENNNYLASLPLLFCCCVLLCLAESSADNDNNNNNNEVYIVYMGAANSTNASLRNDHARVLNLVLRRNEKALVQNYKHGFSGFAAHLSKEEAESIAQKPGVVSVFPDPILKLHTTRSWEFLKYQTQVKIDSLPTAANSQSSDTIIGILDTGIWPEAESFVDTGMDPVPSRWKGTCMKSTDFNSSNCNRKIIGARYYADPNAGNDGDNTARDSNGHGTHVSSTAAGVNVANVSFYGLAEGTAVGGSPQSRLAMYRVCTNFGCRGSAILAGFDDAINDGVDVLSLSLGSPSVLRPDLTSDPIAIGSFHAVERGIVVVCAAGNDGPSSKTVVNDAPWILTVAATTIDREFESNLVLGDNKVVQGNAINFSPLSKTPDFPFINGESAKTSSATVSDARQCHPNALDGTKVKGKIVFCDGQNDTYSTTEKAFQVSQAGGLGMVHVTDQGGSVTQFFGNFPATTVSPKDGAPIFQYLNSTSKPMATILPTVSVIKYKPAPVVGYFSARGPATLSSNILKPDVAAPGVNILAAWLGNGADDDVPQGQKPSAYKVLSGTSMACPHVSGLAANVKSRNPTWTPSAIKSAIMTSAIQNNNMKALLTMDSGSVATPYDYGAGEITTSEPLQPGLVYETTTIDYLNFLCYIGLNVTTIKIISKTVPESFNCPKDLSPYQISNINYPSIVVSNLKGGGAVNVSRTVTNVGEDDETTYSSVVDAPSGVNVKLIPEKLEFTESSKTLSYQVSFSLSSSSKSLNGDQFGSITWSDGKYSVQSPFVLTN* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0215 773 ProSitePatterns Serine proteases, subtilase family, histidine active site. 216 226 IPR022398 -
Amo08g0215 773 Gene3D - 637 773 - -
Amo08g0215 773 Pfam PA domain 397 467 IPR003137 -
Amo08g0215 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Amo08g0215 773 CDD Peptidases_S8_3 111 587 IPR034197 -
Amo08g0215 773 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Amo08g0215 773 Gene3D Peptidase S8/S53 domain 143 633 IPR036852 GO:0004252|GO:0006508
Amo08g0215 773 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 28 771 - -
Amo08g0215 773 Pfam Subtilase family 142 594 IPR000209 GO:0006508|GO:0008236
Amo08g0215 773 Pfam Fibronectin type-III domain 671 770 IPR041469 -
Amo08g0215 773 ProSiteProfiles Serine proteases, subtilase domain profile. 118 620 - -
Amo08g0215 773 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Amo08g0215 773 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Amo08g0215 773 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Amo08g0215 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 771 IPR045051 -
Amo08g0215 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Amo08g0215 773 SUPERFAMILY Subtilisin-like 37 668 IPR036852 GO:0004252|GO:0006508
Amo08g0215 773 CDD PA_subtilisin_like 351 482 - -
Amo08g0215 773 Gene3D - 345 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0215 Amo-Chr8 3580475 3588591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0215 22 773 Subtilisin-like Serine Gene Family AT1G20150 51.890 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0215 K25898 - gmx:100820194 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0215 08 3580475 3588591 Amo17g2107 17 108978939 108986735 hybridization