Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0214 ATGGAGGCACTACAGTGCAGGAACAATAATAATAGTAATACTAATAAGATTATTGTGGTGTTTCTTTCTTATTGGGTTTTGTTGCTGGGTGTTTATTGTTACAGAGCAGATGGTATAATTAAGATGCCAAGGAACGCAACGGTGACAGGAATGATATTATTTGGTGACTCAATAGTGGACACAGGAAATAACAATGAGGTAGCAACATTGGCTAAGTGCAATTTCCTTCCATATGGAAGGGACTTTCTTGGCGGGAAACCAACGGGAAGGTTCTCCAATGGCAAAGTCCCAACTGACTTTATAGCCGAAGAGTTGGGAATAAAAATGCCGATACCATCGTATATGTCTGTAAGTTTGCCGGCCGCGGATCTTCTTACCGGAGTCAACTTCGCTTCCGGTGGCTCTGGTTACGATCCTTTGACTCCAAAACTTCTGTCTGTGATACCATTATCCGAGCAACTGGAGCAATTCAAAGAGTACATTGGAAAACTGAAAGCAAATTTTGGAGAGGAAAGAACCAACTTCATCTTGTCAAAAAGTGTAGTACTTGTGGTAGCCAGCAGCAACGACATTTCCAACTCTTATTTCGCAACAGGAATCAGGAAAGCGCAATATGATATTAACTCCTACACTGATATGTTGGTCCAAATTGCCTCTTCTTTCATTATGGAAATATATAAGTTGGGAGCAAGAAGAATCGGAGTATTTAATGCACCCCCAATAGGATGCTTGCCATTTCAGCGAACTCTATTTGGAGGTACAGAGAGAAAGTGCTCGCAGGAAGTCAACGATGCATCAAAGTTGTTCAATGCTAAATTATCTTCAGTCATGAACTCCCTGAGACATAGTCTCACTCAAGCCAAGCTGGTAGATATGGATGTTTACAATCCTTTGCTTCATATTATTGAAAATCCATCCGAATATGGGTTTGAAGTTGTGGACAGGGGATGCTGTGGCACGGGGACCGTAGAGGCGGCTATACTATGTAACCCTTTGGATCTGCAAATCTGCAATGACGATTCTAAATATGTATTTTGGGACAGTTTTCATCCCACACAAAGGACCTACCAGATTCTTGTGAGTCAAGTCCTAAATAAATATGTAAACAACTTTTGA 1116 0.4113 MEALQCRNNNNSNTNKIIVVFLSYWVLLLGVYCYRADGIIKMPRNATVTGMILFGDSIVDTGNNNEVATLAKCNFLPYGRDFLGGKPTGRFSNGKVPTDFIAEELGIKMPIPSYMSVSLPAADLLTGVNFASGGSGYDPLTPKLLSVIPLSEQLEQFKEYIGKLKANFGEERTNFILSKSVVLVVASSNDISNSYFATGIRKAQYDINSYTDMLVQIASSFIMEIYKLGARRIGVFNAPPIGCLPFQRTLFGGTERKCSQEVNDASKLFNAKLSSVMNSLRHSLTQAKLVDMDVYNPLLHIIENPSEYGFEVVDRGCCGTGTVEAAILCNPLDLQICNDDSKYVFWDSFHPTQRTYQILVSQVLNKYVNNF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0214 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 27 368 - -
Amo08g0214 371 SUPERFAMILY SGNH hydrolase 51 367 - -
Amo08g0214 371 PANTHER GDSL ESTERASE/LIPASE EXL3 27 368 - -
Amo08g0214 371 Gene3D SGNH hydrolase 39 369 IPR036514 -
Amo08g0214 371 Pfam GDSL-like Lipase/Acylhydrolase 53 361 IPR001087 GO:0016788
Amo08g0214 371 CDD SGNH_plant_lipase_like 51 367 IPR035669 -
Amo08g0214 371 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0214 Amo-Chr8 3577373 3580819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0214 45 369 Pollen Coat Proteome AT1G75910 39.329 4.95e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0214 - - gmx:112997680 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0214 08 3577373 3580819 Amo17g1570 17 60605212 60609339 hybridization
Amo06g0920 06 12660936 12662338 Amo08g0214 08 3577373 3580819 PCT