Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0194 ATGGGAGCGGTTTGTTCAGCTGGCATGGCTGAGGGCAATGCTGAGCTGCGAGGGAAGAATACTTTGGGGTTTTCTGGGAAGCTTAAGAAGGAAGATAGCTTTATCAACAAAAAGTCAGAAACTTTTTCAGATTCAAGGAGTAATAGTCGTGGTAAAAAGCAAAAGAAGCAGGTCGCTGATTTTTCCGGCGAACTCAAATCCTCCAGTCCCGCTCCAAAAGGGGCAAAACAGTTCATCCACAGGGGCTCTTTTCTGGGAAGAGCTAGTGAGAAGGCCGTTGATGTTCTAGACTCACTTGGGAGTGGCATGCCAAAGTTAAACACCAATAGCGGGTTTGCCTCTGGAATGACTTCTAGAGGCAAAAGAATATCTATATTGGCTTTTGAAGTAGCTAATACAATAACCAAAGGGTCAATTCTGTTTCAATCACTTTCTGAAGAGAACATTCAGTTCCTTAAAAAGGAGATTCTACAATCAAAAGGAGTTCAACAATTAGTTTCAACTGATATGACTGAGTTAATTAATCTTGCTGCGGCTGACAAAAGGGATGAACTTTGTGGTTTCTCACGGGAAGTAGCAAGATTTGGAAATATGTGTAAAGATCCACAGTGGCACAATCTAGATCGATATTTCTCAAGATTAGACTTGGACCATGCCTTGGGTGATATGCAATCCAAGGAAGAGGCAGAAAAGACAATGCAGGAGATTACCAGTCTAGCTCAGCAGACTTCTGAATTGTACCATGAATTAAATGCTTATGACCGTTTTGAACAAGATTATCAGCAAAAGATTAAGGAAATGGAGTCCTTAAATCTGCCTTTAAAAGGTGAGGGTATCACATTTTTTCAAAGTGAGCTAAAGCATCAAAGAAAGATTGTGAGGAGCTTGAAAAAGAAGTCTCTTTGGTCCAGAAACATGGAAGAGATAGTTGAAAAGCTTGTTGATATCGTTACCTATATGCATCAAACTATTCATGAGTTCCTCGGAAACAACGGTACAGCTGCTGCCGATAACTATAGTAAAGGGTCTCAAAGACTGGGCGAAGCTGGTCTTGCACTGCACTATGCTAATATCATCAATCAGATAAATATGATTGCTTCTCGCCCAACAGCTCTTCCCCCAAATACAAGGGACACGTTATATCATGGTTTGCCTAATAATATCAAGAGTTCTCTTCCCTCTCGGTTGCAATCCATTGATGTCACAAAAGAGCTGCCGATCACTCAGATTAAAGCCGAAATGGATAAGACTCTTCAATGCCTTCTTCCATTTGCCACAAATACTATCAAAGCACATCAAGGTTTTGGATGGATCGGTGAATGGGCAAACACAAGTGGTAACGATTTTGGTGAGAGTACACCCGCTGAAAGTAGTAAGCTGATGCGCATCCAGACACTCTATTATGCTGATAAGCATAAAATCGATAATTACATCGTTGAATTGTTGGCATGGCTTCACCATCTGATAAGCTTTGTAAGATCCAGACAGAATACCCTGAAGCAAATGCCTATGCGATCTCCTCCAAAAGGGAGATTCCAGCCCAAGATGCTTGAGTTCCTTTCCCCAGACGGCAGTGGCAACAAGACGTTGGGACGTGAAGTCTCTGAAGAGGATAGGAGGTTGTTAGAGGAGGTGATTACAAGGAGGAGCCGTCCTGGAATTAGCAAAAGCATGGATTTTGATGCTCCAAAGAAAAGAGAATCAAGAAGAGATCGGTACATGGCCAAAAGCGCTAGCAGTTCGCCTGTCAAGGAGTTCTTGGGTACGGGTATGGGTACGAGACTCGGCTCAGAGCAACAAAACTACAACGTTTTGGATATCATGGATGGATTAGGATACCGAGACCTTTCATTCTGA 1857 0.4243 MGAVCSAGMAEGNAELRGKNTLGFSGKLKKEDSFINKKSETFSDSRSNSRGKKQKKQVADFSGELKSSSPAPKGAKQFIHRGSFLGRASEKAVDVLDSLGSGMPKLNTNSGFASGMTSRGKRISILAFEVANTITKGSILFQSLSEENIQFLKKEILQSKGVQQLVSTDMTELINLAAADKRDELCGFSREVARFGNMCKDPQWHNLDRYFSRLDLDHALGDMQSKEEAEKTMQEITSLAQQTSELYHELNAYDRFEQDYQQKIKEMESLNLPLKGEGITFFQSELKHQRKIVRSLKKKSLWSRNMEEIVEKLVDIVTYMHQTIHEFLGNNGTAAADNYSKGSQRLGEAGLALHYANIINQINMIASRPTALPPNTRDTLYHGLPNNIKSSLPSRLQSIDVTKELPITQIKAEMDKTLQCLLPFATNTIKAHQGFGWIGEWANTSGNDFGESTPAESSKLMRIQTLYYADKHKIDNYIVELLAWLHHLISFVRSRQNTLKQMPMRSPPKGRFQPKMLEFLSPDGSGNKTLGREVSEEDRRLLEEVITRRSRPGISKSMDFDAPKKRESRRDRYMAKSASSSPVKEFLGTGMGTRLGSEQQNYNVLDIMDGLGYRDLSF* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0194 618 Pfam Domain of unknown function (DUF3475) 125 181 IPR021864 GO:0045927
Amo08g0194 618 PANTHER OS01G0873900 PROTEIN 1 611 IPR045021 GO:0045927
Amo08g0194 618 PANTHER DUF668 FAMILY PROTEIN 1 611 - -
Amo08g0194 618 MobiDBLite consensus disorder prediction 553 574 - -
Amo08g0194 618 Coils Coil 226 246 - -
Amo08g0194 618 MobiDBLite consensus disorder prediction 553 585 - -
Amo08g0194 618 MobiDBLite consensus disorder prediction 1 76 - -
Amo08g0194 618 MobiDBLite consensus disorder prediction 24 60 - -
Amo08g0194 618 Pfam Protein of unknown function (DUF668) 345 430 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0194 Amo-Chr8 3282362 3287040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0194 - - aip:107609893 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0194 08 3282362 3287040 Amo17g2121 17 110070844 110075523 hybridization
Amo06g0865 06 11890807 11895772 Amo08g0194 08 3282362 3287040 PCT