Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0188 ATGGCTCTCTCTAAGCTTCTAGCTGCTTCCCTTATTGTGTCTTTTCTCCTCCTCCATCTTGGGGAAGCTTATGAATCGCAGGAGGCACCCCAGCAGACAATTGAGGATTCTGTTAATAATAAGAAGATAGATTGCAGTGGAGCATGCAGTGTGAGATGCAGCAAAGCATCTCGTCAAAGGATGTGCAAGAGAGCGTGTGGAACATGCTGCCAAAGATGCAACTGCGTACCACCGGGCACTTCCGGCAACCAAAAACTGTGTCCCTGTTATTACAACCAAACCACCCACGGTGGCAGGCGCAAGTGCCCTTAA 312 0.4936 MALSKLLAASLIVSFLLLHLGEAYESQEAPQQTIEDSVNNKKIDCSGACSVRCSKASRQRMCKRACGTCCQRCNCVPPGTSGNQKLCPCYYNQTTHGGRRKCP* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0188 103 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 103 - -
Amo08g0188 103 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 103 - -
Amo08g0188 103 Pfam Gibberellin regulated protein 44 103 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0188 Amo-Chr8 3215547 3216624 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0188 - - gmx:100790448 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0188 08 3215547 3216624 Amo06g0870 06 11938672 11939266 PCT