Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0182 ATGAGATCATTCACATCACATGCTGTGCCTTCACGTACAGTAGTGAGAGACAGAGAAGAAGAACGGAGATGGCAGGGCACGAAGTTAGGTAGCCATGGATCACTTGCTGTGTTGTATATGTATAGAGAACTTGCATGCCGCAGGCACCACGTTCCCTTTGATTTTTCACAGTTCACAACAAACTTGACATCAATACACAATGGCTATGAGAAAATCAATTTAGGAAGGAAACAACAGCAGCAAGGTGAAGACGTTCCAAAGGGTCACTTTGTTGTTTATGTTGGTGGAGTTGGAGAGAAGAGAAGCAGGTACATTCTTCCCATCTCCTTCCTCAGCACACCACAGTTTCAGATCCTCCTTCATCAGGCAGAAGAAGAGTTTGGATTTGATCATCAAATGGGTCTCACCATTCCTTGTCAACAACATGTTTTTGAGTCTCTTACTTCCATGCTCAGATGA 459 0.4357 MRSFTSHAVPSRTVVRDREEERRWQGTKLGSHGSLAVLYMYRELACRRHHVPFDFSQFTTNLTSIHNGYEKINLGRKQQQQGEDVPKGHFVVYVGGVGEKRSRYILPISFLSTPQFQILLHQAEEEFGFDHQMGLTIPCQQHVFESLTSMLR* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0182 152 Pfam Auxin responsive protein 71 151 IPR003676 GO:0009733
Amo08g0182 152 PANTHER SMALL AUXIN-UP RNA-RELATED 74 152 - -
Amo08g0182 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 74 152 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0182 Amo-Chr8 3130540 3132884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0182 12 147 Calmodulin-binding Proteins AT5G20810 33.824 1.95e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0182 K14488 - han:110918230 124.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0182 08 3130540 3132884 Amo17g2158 17 111123411 111126032 hybridization