Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0177 ATGTCATTATCATCCGGGATCGGAAAATGCAGCAAGATCCGCCACATAGTGTGGCTCCGGCAGATGCTGCGGCGGTGGCGCAACAAGGCCCACAATAAGTCGTCGTGGTCGAAGAGCCAGCGTACGCCCTCTGATGTCCCCGCAGGACACGTGGCGGTGTGCGTGGGCAGCAACTACACGAGATTCGTGGTGCGCGCTACCCACTTGAACCACCCGGTGTTCAAGAACCTTCTCTTCCACGCGGAGGAAGAGTACGGTTTCTCGAACCACGGTCCCCTCGCTATTCCATGCGACGAAGCCCTCTTCAAAGAGATCCTCCGCTTCGTTTCCCGATCTGACTCATCGTCTTCCCGCTTCGTTAACCTCGATGACCTCCAGAGATACTGCCACGCTGGCAGCATCCGTACCAACCTGGACTTTTTGCCCGACTCCATGCCGTTACTCACTAACAACTAA 456 0.5658 MSLSSGIGKCSKIRHIVWLRQMLRRWRNKAHNKSSWSKSQRTPSDVPAGHVAVCVGSNYTRFVVRATHLNHPVFKNLLFHAEEEYGFSNHGPLAIPCDEALFKEILRFVSRSDSSSSRFVNLDDLQRYCHAGSIRTNLDFLPDSMPLLTNN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0177 151 Pfam Auxin responsive protein 19 108 IPR003676 GO:0009733
Amo08g0177 151 PANTHER SMALL AUXIN-UP RNA-RELATED 8 148 - -
Amo08g0177 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0177 Amo-Chr8 3035643 3036098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0177 7 142 Calmodulin-binding Proteins AT4G34750 52.113 2.52e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0177 K14488 - zju:107420382 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0177 08 3035643 3036098 Amo17g2163 17 111479514 111479969 hybridization