Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0166 ATGGGAAGACCGGCCTCCTGCTTCAAGCTAATTATATGCGGCGGCGATGCGGCGGAGAAGGACGGTTACCAAGTAGCTCAGATCAAGGATTCTAATGATAAACGTGGTTGGAGTTTCCGCAAGAAATCTGTAACTGCAAARCAACGTGTGCTTAGCAATACTGTGACTGCAGATTCCTCATCTGCAAATAAGGAGAGTTCACAATGTAATAGTTTTAATTTTGAACCTAACGTTGTTGACAAGGTTTACACAACAAATAACTCTGATAAGAAGCCCAATTTATCCTSCATTGAAAGTTCAGAAACGAATGTCATTGAAGCAGAGAGTAAAAAGGACGTGAATCCCCCAGAATCTGCTGTTATCACTATCCAGGCTGCCATCAGAGGGTTGCTGGCTCAGAGAGATTTAATGCAGATTAAGAATTTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGCCATGCTGTAGGAACCCTTCGCTGTGTTCAAGCCATTGCTAAAATGCAGCTTCTYGTTCGAGCTCGTCGGGCTCAGCAATCACAGGAAAATCAAAGCCACATGAGCAAGTCAAATGTGATGGATGCATCCATTGAGAAGCTGCTTAGCAGTAGGTTTGCTCGCCAGCTATTGGAATCAACACCAAAAAATAAACCTATACATGTCAAGTGTGATCCTTCTAAAGCTGATTCTGCATGGAAATGGTTGGAGAGGTGGATGTCTATGTCTTCAAAGTATACTTCAGATGACAAAAAAACAAGTTCCCTGACAGAGGAATCAGAAGTTTATCCACAGACAGCTGACACAAAGCCCAGTGTGGAGGATTCAATTCTACCTTCTAGGGATGAAAAGAAGCCAATTACTCATGATGCTAATAACTTCAGCTTTCAAGCAATCCGCTCTCCATCACCTTCTAAAAAGGCAGTTGAATTTGGTGCTAAAGTAGCCTCAGCAGAAATCGGTTCSTTTAAAGATGRAAAATCAGCATCAGATGTAAGTGCCCGACCAGAGGTTAAATCCCTTCCTCAGAAGCCTGAAATTGATGGYGAGCYGCGCAAACGATCAATGAAAAGATATGCATCAGACCAACTAGAAGCTGAACGAAATAAATCTGGACATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAATGATAAATTCAGGTAGGACAAGCAGTTTTTCTGATCAAACTGCAGCAGTTGAATCAGAAGCAGACACCTCTTCTGTCAACATGGATATGGCATATAGATCAAAAGAGTTATCTGAGAATTCTGGTCCCTTTTTTTCTAAGMTTGGTGGTTCTCAATGTGGTACTAAACTATCTATTTCTTCCACTCTTGATWCACCCAATGTATCCGAGGTTGGTCCTATTGAAGATGACCAAGATGCCAAAGATTTAGAAGGGGTTGGAAATCTTGACAAGAAAACAAACCTTGATGTTGATACCGATATTCCAGGTGCTATTCCATCTTCTCACTTAGCCACTGCTGTTATGGATCAGACAGAAACTGTTGACGAAATCAATGGCATTATGGTTCACTCATCAGTTGCAGTGGACTCTGAAGAGCCTGTTAGCAAGACTGAGAAAAATGCATCTGATGTACAGAGAGATCAAAATGAGGATCCTCTGCAAGGTTTCAGATCATCTCGAGAAGCATCACCTAAAACACACACAAAGGTCCCTGAATCACAAGAAACACCTTCGAGTCAGTTATCTATGAAACCCAAAGACGGCAAAGACAAGTCTAGATCCAACAGTAAACTTGGGACCCCACCAGTGGTTAACAAATCACCTGTAAATGGAAATCATGATTCGAGCTCTAGAGGTCAGCCGAGTGGGAAGCGACGCAATTCATTTGGCTCAGTTAAAGCTGATCACATTGATCAAGAACCTACAGGTAACACAAATAACAATAGTCCTCTTCCCCGTTTCATGCAAGCAACAGAATCAGCTAAGGCCAAAACCAGTGCAAATAACACACCAAGGTCAAGTCCAGATGTGCATGAACGAGATGTTCAAGTTACGAAGAGACACTCGTTACCAGGTGCCACCGGTAGGCAGGTTTCTCCACGCATCCAACAATCGATGTCTCAACCACAGCAGAACCCGAAGGGATATTGTGTACAGCCTCAGCCTACACAAGAGAGAAAATGGGTGAGGTGA 2205 0.4272 MGRPASCFKLIICGGDAAEKDGYQVAQIKDSNDKRGWSFRKKSVTAKQRVLSNTVTADSSSANKESSQCNSFNFEPNVVDKVYTTNNSDKKPNLSXIESSETNVIEAESKKDVNPPESAVITIQAAIRGLLAQRDLMQIKNLVKLQAAVRGHLVRSHAVGTLRCVQAIAKMQLLVRARRAQQSQENQSHMSKSNVMDASIEKLLSSRFARQLLESTPKNKPIHVKCDPSKADSAWKWLERWMSMSSKYTSDDKKTSSLTEESEVYPQTADTKPSVEDSILPSRDEKKPITHDANNFSFQAIRSPSPSKKAVEFGAKVASAEIGSFKDXKSASDVSARPEVKSLPQKPEIDGEXRKRSMKRYASDQLEAERNKSGHGSRKVSNPAFIAAQSKFEELSSMINSGRTSSFSDQTAAVESEADTSSVNMDMAYRSKELSENSGPFFSKXGGSQCGTKLSISSTLDXPNVSEVGPIEDDQDAKDLEGVGNLDKKTNLDVDTDIPGAIPSSHLATAVMDQTETVDEINGIMVHSSVAVDSEEPVSKTEKNASDVQRDQNEDPLQGFRSSREASPKTHTKVPESQETPSSQLSMKPKDGKDKSRSNSKLGTPPVVNKSPVNGNHDSSSRGQPSGKRRNSFGSVKADHIDQEPTGNTNNNSPLPRFMQATESAKAKTSANNTPRSSPDVHERDVQVTKRHSLPGATGRQVSPRIQQSMSQPQQNPKGYCVQPQPTQERKWVR* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0166 734 MobiDBLite consensus disorder prediction 642 677 - -
Amo08g0166 734 SMART iq_5 115 137 IPR000048 GO:0005515
Amo08g0166 734 SMART iq_5 138 159 IPR000048 GO:0005515
Amo08g0166 734 ProSiteProfiles IQ motif profile. 138 167 IPR000048 GO:0005515
Amo08g0166 734 MobiDBLite consensus disorder prediction 260 275 - -
Amo08g0166 734 Pfam Protein of unknown function (DUF4005) 648 711 IPR025064 -
Amo08g0166 734 MobiDBLite consensus disorder prediction 573 587 - -
Amo08g0166 734 PANTHER PROTEIN IQ-DOMAIN 32 1 719 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 454 491 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 330 382 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 343 376 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 599 631 - -
Amo08g0166 734 Gene3D - 117 157 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 471 491 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 694 723 - -
Amo08g0166 734 PANTHER IQ-DOMAIN 5-RELATED 1 719 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 522 734 - -
Amo08g0166 734 Pfam IQ calmodulin-binding motif 118 135 IPR000048 GO:0005515
Amo08g0166 734 Pfam IQ calmodulin-binding motif 143 157 IPR000048 GO:0005515
Amo08g0166 734 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Amo08g0166 734 MobiDBLite consensus disorder prediction 536 550 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 249 290 - -
Amo08g0166 734 MobiDBLite consensus disorder prediction 551 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0166 Amo-Chr8 2844829 2848660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0166 98 734 IQD Protein Family AT1G19870 37.758 3.99e-97 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0166 - - adu:107460052 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0166 08 2844829 2848660 Amo17g2176 17 111667499 111671015 hybridization