Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0165 ATGCGTGGATTACACAAATCGAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGATTAGGTTATTCTTATCAGAGGAATCTCCTTCTCAAGTTGGTTTAAATTCTCAAGATCACCTCCAAGCAAAGACATCATTGCTATTACCTCCAGGAGGAACAAGTTCTGATGACTTTCTACCTCCTGGATTCGAGGGAACCCAAGCGTCGACCCATTTTGAGGTTGATCTGTCTCAAATACCAGTGTCTAGGTGGACTACACCATGCAAGATTATACTTAATTTAGCGTGGCAAGTGGTGGCTGGGGAAGAAAGCAAGGAGGTAGAAGATCAATGTCAGAGGGAGATGAGAGTACTTGAAGCAATTTATCCCCGCCCATCMTCYATTCCTCCAAACCCATCTGTTTCAGCGGATGTCGAGGCTTCCCAGTGCATTGATAGCCAAACTACCTTGATACCAATTACACCTATGGAAGATGAAGATGCTGCAACTGATTCTATCTCACAATCTAATTCTTTTGAATTACCTCCTGKCATACCAAATGGTCCAAACCCCCATACAAGTGTGCAGTTAGCTCATGGCTCATTATCTGATGCATTAACTAGTGTGATGAAGAATAATGAACATGGGAATTTGATTGATCCTGAATTATTCAATAATATTCTCAAAAACCCAGAAGTGATTGAGAAACTGGTTAGAGATTATGGAGCCTCTAACAGTTTGCAGAGTGCAAATAATCCGGGGTCATCTTCAGTGACATTTTCACATCCATCTCTTYCTAGTCATCAAGTAGAAGCCAGTGCACCARCATCAGTTACATTTTCGTCTCCTAACTATCCTTCTTCAGGTGGAAATCAAGTAGGACCTGTTTCTACCCAATGGCTTCCTAGGCCTCCGATGAGTCAAGCTACAATTTCTTCTGCCTCAGACGTCTCTCTACCAAAGGATGTAAATTATTACAAGAGCTTAATTCAACAACATGGAGAAGAGAGACAAGAAACMCACCCTTACACTGCTAACCGTCAAATCCAGAGACCAATGGTGAACCATGAGACACCACAACACAATTCTAGATCAAGGGAAACTAAATCSAAGATAATGAAACCTTGTATATTCTTTAACAGTTCTAGAGGATGTCGAAATGGTGCTAATTGTGCATACCAACATGATGTAACATTCCAATCACGAGGTAGTGCCGTGCCTTCGGTACAAAGTTCAAAGAGAATGAAAATGGATAGTGAGATCAGCAGTTAG 1254 0.4123 MRGLHKSKRVSWASDLDLCQIRLFLSEESPSQVGLNSQDHLQAKTSLLLPPGGTSSDDFLPPGFEGTQASTHFEVDLSQIPVSRWTTPCKIILNLAWQVVAGEESKEVEDQCQREMRVLEAIYPRPSSIPPNPSVSADVEASQCIDSQTTLIPITPMEDEDAATDSISQSNSFELPPXIPNGPNPHTSVQLAHGSLSDALTSVMKNNEHGNLIDPELFNNILKNPEVIEKLVRDYGASNSLQSANNPGSSSVTFSHPSLXSHQVEASAPXSVTFSSPNYPSSGGNQVGPVSTQWLPRPPMSQATISSASDVSLPKDVNYYKSLIQQHGEERQETHPYTANRQIQRPMVNHETPQHNSRSRETKSKIMKPCIFFNSSRGCRNGANCAYQHDVTFQSRGSAVPSVQSSKRMKMDSEISS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0165 417 MobiDBLite consensus disorder prediction 271 303 - -
Amo08g0165 417 MobiDBLite consensus disorder prediction 168 189 - -
Amo08g0165 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 412 - -
Amo08g0165 417 MobiDBLite consensus disorder prediction 398 417 - -
Amo08g0165 417 ProSiteProfiles Zinc finger C3H1-type profile. 364 392 IPR000571 GO:0046872
Amo08g0165 417 MobiDBLite consensus disorder prediction 46 65 - -
Amo08g0165 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0165 Amo-Chr8 2838150 2841662 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo08g0165 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0165 - - adu:107460053 832.017