Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0111 ATGTCAAACTCCATGACCAATCAAAACCAATTTGAGGGGCAAGAGTTAGATGCTGCTTATGGTTCTTGTTTGAGAAACAACCCTGCATTCACTACTGAGTCCATAGGAGGAGTGTTTCCCATTATGGAACCTCACCATCATGCACTAGCTTCAGGCTCTGAGATGAGTCACACAAGGCATTTGATGGATCTTCTTGGAGCAGCTGCTAATGAGAGCAATCATCATCATCATAATCATCACCAACGACAACCTCAAGGGCTCTCTCTTTCCTTAGGGTCTCACATGATTGTTCCTTCTCATGATGAATACAGTAGGCATAATAGTAGATCCTTCGTTAATGGTTTCATGAACCCCAATAATTACTTCATCCCTGCCCAAGATTCAAGGGCAGTGGAGAATAATCTAACTAGTGACTACTACTTCAACAGTGCCACCACCACCACTACTTTTGCTTCATCTTCTGCCTCTTTTGGAAGTGAATCTTTTGCTGCTCTCATTGGGAACTCTAGGTACCTCAAACCAGTACAGTCCCTTCTTGAAGATCTTGTTGATGTTGGTGGAAACGTGGTTGATAGAATCAATGACAAGTATGTGGAGAAGTTGTTCCATGGTGGCAGGAACAGTTCCCGAACACTCTCCTCACAGTTCAGGAACAACATAAACACTGGTGTCTTGTCAGCTGAAAAACAAGAACATCAAATCAAGATTGCAAAATTGATTTCTTTGTTGGACGAGAAGGGAGGTATGAGAAATACTACCATCAAATGGAACAAGTGGTGGCATCGTTTGAGGATAGCAGGTGAAGGAGCAGCAAAATGTTACACTGCATTGGCACTACAAGCCATGGCTAGGCACTTCTGCAACCTCAGAGATGCAATAATGTCACAGATAAATTTGGAGAAAAAGAAACTGTTGCAAGATTTGCCTAAACAACTCAACAATGGGTTATCTCAACTAAGCCTATTTGATAGAGACACAAGTAGACAAAGCAGAATGTCTTCTCTCCAACAACTTGGGATGATCCAAAGTCAACGCAGCCAACAAGTGTCGAATTGGTTCATAAATGCAAGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTACGAACAAGAGTTTGGAGACTCTTCAGAAGACTCCAACCCACAACCTGATTTCACCACCGATGATGCTACTCACTGCCACCACCACGATTCAAATTAA 1203 0.4248 MSNSMTNQNQFEGQELDAAYGSCLRNNPAFTTESIGGVFPIMEPHHHALASGSEMSHTRHLMDLLGAAANESNHHHHNHHQRQPQGLSLSLGSHMIVPSHDEYSRHNSRSFVNGFMNPNNYFIPAQDSRAVENNLTSDYYFNSATTTTTFASSSASFGSESFAALIGNSRYLKPVQSLLEDLVDVGGNVVDRINDKYVEKLFHGGRNSSRTLSSQFRNNINTGVLSAEKQEHQIKIAKLISLLDEKGGMRNTTIKWNKWWHRLRIAGEGAAKCYTALALQAMARHFCNLRDAIMSQINLEKKKLLQDLPKQLNNGLSQLSLFDRDTSRQSRMSSLQQLGMIQSQRSQQVSNWFINARVRLWKPMIEEMYEQEFGDSSEDSNPQPDFTTDDATHCHHHDSN* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0111 400 Pfam Associated with HOX 166 294 IPR006563 -
Amo08g0111 400 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 347 381 - -
Amo08g0111 400 Gene3D - 286 380 - -
Amo08g0111 400 SUPERFAMILY Homeodomain-like 337 374 IPR009057 -
Amo08g0111 400 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 46 345 - -
Amo08g0111 400 MobiDBLite consensus disorder prediction 372 400 - -
Amo08g0111 400 SMART prehox3 160 295 IPR006563 -
Amo08g0111 400 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 347 381 - -
Amo08g0111 400 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 46 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0111 Amo-Chr8 2220635 2222264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0111 161 342 Homeobox Transcription Factor Family AT1G75430 40.000 1.14e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0111 - - gmx:100807944 384.415