Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0075 ATGGGTTGGACAAGAGAAGAGAATAGGCGCTTTGAGGATGCTCTTGCGGTGCATGGGCCGGACGACCCAAACCGGTGGCAGAAGGTGGCGAACGCCGTGGGTGGCAAATCCGTTGAGGAGGTGAAAAGGCATTATGAGGTGCTTAAAGAAGATGTGATTCGAATAGAGCGTGATCAAATTCCACTTCCCAGGTACAGAGGTAGTGGTGGCATCAATGGAAGGCATATCTATGGCCAATAA 240 0.5083 MGWTREENRRFEDALAVHGPDDPNRWQKVANAVGGKSVEEVKRHYEVLKEDVIRIERDQIPLPRYRGSGGINGRHIYGQ* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0075 79 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Amo08g0075 79 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Amo08g0075 79 CDD SANT 3 49 IPR001005 -
Amo08g0075 79 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Amo08g0075 79 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Amo08g0075 79 SMART sant 3 51 IPR001005 -
Amo08g0075 79 Coils Coil 38 58 - -
Amo08g0075 79 Gene3D - 2 50 - -
Amo08g0075 79 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Amo08g0075 79 Pfam Myb-like DNA-binding domain 3 48 IPR001005 -
Amo08g0075 79 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0075 Amo-Chr8 1714042 1715129 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo08g0075 Myb_DNA-binding 1.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0075 - - gmx:100786029 134.42