Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0020 ATGGCTAAAGGGTTCAAGCTGAAATTCAATATCCCTTTATTCCAAATGTGTCGTTCAAAAGACCCTTCCGCTTTCCCAGGAAACCCTGTAGTTCCTGCAATATACCGTCTTTCTCCGGTGAACCCTAAAGAGCATGACGTTGGATACCCTTCAAGCCTGTTAGTACCTCCTCCGCCACCCTCCTCACCGGAACACAGGGGTAGTAAGGTCACTTCAAGAATCATGTCCTTACGCCAAATGTGCCGTGACGACCACCGCGACAAGCAAGTAAACACCAGAGGCAGAAGAAGCACATCCAGCGTTCCTTCCAGGAGAAGCAACGTGGCGGTTGACAACGAAGAAGAAAGCGAGTCTCTAATTTCTTGCACCACAAGTTTCTCGGACGATTCTTATTCTCTCAAACCGGAGAGAGAGTTAGTTAGCAGCAGCAGTGGCAGCAGGAGGCACATGAGGAGGATAAGCAGCGTGAAGAAGGTTCAGAGAATGAGGTTCAACACTGCGAGATTAGAACTACCGGAAACAGAACAAGTGAAGAAGACAAAGACAAAGACGAAGACGAAGGTTGTGTCGACGGCATCAACCACAAGGATGAGGCGGAGCAGCGCGGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAATCGAAGGATCCGTATGAAGACTTCAAGAGATCAATGGTGGAGATGATAAGGGAGATGGAGATGCGTGATGCAGAGGATTTGCAGCAACTGCTTCAGTGTTTTTTGGCTCTGAACTCGAGGTGCTATCACGATGTGATTGTGCGTGCTTTCATGGAGATATGGCAAGAGATGTTCGTTATGAAGCCTGCGTCCTCCAACACCAAAGAGATCAATTGCAACTAG 867 0.4879 MAKGFKLKFNIPLFQMCRSKDPSAFPGNPVVPAIYRLSPVNPKEHDVGYPSSLLVPPPPPSSPEHRGSKVTSRIMSLRQMCRDDHRDKQVNTRGRRSTSSVPSRRSNVAVDNEEESESLISCTTSFSDDSYSLKPERELVSSSSGSRRHMRRISSVKKVQRMRFNTARLELPETEQVKKTKTKTKTKVVSTASTTRMRRSSAEGKVRESFAVVKKSKDPYEDFKRSMVEMIREMEMRDAEDLQQLLQCFLALNSRCYHDVIVRAFMEIWQEMFVMKPASSNTKEINCN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0020 288 MobiDBLite consensus disorder prediction 94 116 - -
Amo08g0020 288 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 61 - -
Amo08g0020 288 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 210 272 IPR006458 -
Amo08g0020 288 MobiDBLite consensus disorder prediction 78 93 - -
Amo08g0020 288 ProSiteProfiles OVATE domain profile. 212 271 IPR006458 -
Amo08g0020 288 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 276 IPR038933 GO:0045892
Amo08g0020 288 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 61 IPR038933 GO:0045892
Amo08g0020 288 PANTHER TRANSCRIPTION REPRESSOR OFP7 60 276 - -
Amo08g0020 288 MobiDBLite consensus disorder prediction 48 116 - -
Amo08g0020 288 Pfam Transcriptional repressor, ovate 216 273 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0020 Amo-Chr8 704758 705624 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo08g0020 Ovate 8.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0020 - - aip:107608440 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0020 08 704758 705624 Amo17g2256 17 115730951 115731793 hybridization