Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2510 ATGGGAAAAGCTAGCAGGTGGTTGAAGGGGTTATTGGGATTGAAGAAGGAGAAGGATAGCTATGACAATTGTGGTTCAATGGCTGCTTCTACTGACAAGAAGGAGAAGAAACGTTGGAGTTTTGCAAAGTCTGCCAAAGATGGAGATTTGACTCAAAATGCTTCTACAAATTATGGAGTCAGGGGCTCTGACTCTGACTCTGCTGATGCTTGGATCAGATCTTGTGCTGCTGAAAAAGGGAATGAGCAGAACAAGAATGCCATAGCCGTGGCAGCCGCCACGGCAGCTGCAGCGGATGCTGCCGTGGCGGCCGCCAATGCTGCCATGGCAGTTGTGAGGCTAACAAGCCATGGAAGAGGAACATTGTTTAGTGGAAGCAGGGAGAAGTGGGCTGCATTGAAGATCCAATCTTATTTCAGAGGTTACTTGGCTAGGAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTAGTTAGAGGGTATCTAGTTAGGAAAAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAGGTTGCCGCGAGAGCTCGCCGTTCGATGATCAAGGCGAATAGGTTTCGGCCTCAAACTCCTGGAAGAAGATATGTGCAATGGTATGATGAAACAAGAAGTGAGTTCCATAGTAAGAGGCTACTACCAACAAGCAAATCCTATGAAACATCCTTAAATATGAAAGGATTTGATGAGAGCCCCAAGAATGTTGAAATTGATACATACAGGCCACAATCAAGATCAAGGAGAATCACAACAACTACTATGTCTACTCAAAAAGACCACCTTCACTATCAAGCAATCTCAGTTCTTGAATGCAGGCATCCTCCTCAGCATTTGGAATGGTACTCGAACACGGATGAATGTGAGATCGCAACAGCTCGCAGCACGCCTCGTCTGACGAATGCTCCGGCTACACCAGTGAAGAGTGTTTGTGGAGAGTCCTTTAGGCCTTACTGCAATTCCCCTAACTACATGGCCAATACTCAGTCATATAAGGCAAAGGTTAGGTCTCATAGTGCTCCAAAGCAAAGGCCTGAGCCTAAGAAGAGGTTCTTACTCACTGAAATAATGGCAGCAAGAAATAGTACTAGTGGTGTTAGAATGCATTGGTCATCCAAATCACACTCTCAACATTATTGCAGTTTTGACAGACTTGAGAGGAAACTGAAATAG 1206 0.4536 MGKASRWLKGLLGLKKEKDSYDNCGSMAASTDKKEKKRWSFAKSAKDGDLTQNASTNYGVRGSDSDSADAWIRSCAAEKGNEQNKNAIAVAAATAAAADAAVAAANAAMAVVRLTSHGRGTLFSGSREKWAALKIQSYFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQVAARARRSMIKANRFRPQTPGRRYVQWYDETRSEFHSKRLLPTSKSYETSLNMKGFDESPKNVEIDTYRPQSRSRRITTTTMSTQKDHLHYQAISVLECRHPPQHLEWYSNTDECEIATARSTPRLTNAPATPVKSVCGESFRPYCNSPNYMANTQSYKAKVRSHSAPKQRPEPKKRFLLTEIMAARNSTSGVRMHWSSKSHSQHYCSFDRLERKLK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2510 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 170 IPR027417 -
Amo07g2510 401 SMART iq_5 127 149 IPR000048 GO:0005515
Amo07g2510 401 SMART iq_5 150 171 IPR000048 GO:0005515
Amo07g2510 401 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Amo07g2510 401 Pfam IQ calmodulin-binding motif 155 169 IPR000048 GO:0005515
Amo07g2510 401 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Amo07g2510 401 Gene3D - 124 180 - -
Amo07g2510 401 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Amo07g2510 401 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Amo07g2510 401 Pfam Protein of unknown function (DUF4005) 307 375 IPR025064 -
Amo07g2510 401 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2510 Amo-Chr7 72027477 72030831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2510 1 379 IQD Protein Family AT3G16490 50.380 9.96e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2510 - - gmx:100797686 402.134