Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2492 AAGTTATTGCGGGTCCAGTCCGTTACCACACCACTTACCAGCAGCCAACGACTCTCTCCAAACACGAAAAAGCCCACTAAAACCCCAAACCAACCTTTGCCTAAATCTCAAACCAGAAACTCCCAGGGTCTGTCCGGTCATTTTACACCCCCCTTCACTGAATTCCTTCCCCGCCGCTTAAACGCCACCGTCGCGAGGCCCATTCCCGCAGCTGCACTTCAAACTCGAAAGAAGAGAAGAATGAGTGGAGCTTCGTTAACAGGCTTGCAAGACCACCTCAAACTGGCAAGAGAGTACGCTCTCGAAGGACTCTACGACACTTCCATTATCTTCTTCGACGGCGCCGTTGCTCAGATCAACAAGCATCTAAACACTGTTGAGGATCCGTTAATCCGAGCGAAATGGATGAACGTGAAGAAAGCTCTGTCGGAGGAAACCGAAGTGGTGAAGCAGCTGGATGCGGAGAGAAGGGCATTTAAGGAAACTCCTGTTGGGAATGGGAGGAGGCGTCCTGCTTCACCTCCGATCTCTACCAAATCTAACTTCGTTTTTCAGCCGTTGGATGAGTATCCAACTTCTTCATCCAGCGGTCCAGGTGGTCCCTTGGACGATCCCGATGTGTGGAGACCGCCCAGTCGAGATGATTCTAGGTCTGGTAGCGGGAGAAGGCCCGTTGTTTCTGCCCGCGGGCCTACTCGCAAGTCCCAGCAGGATGGAGCTTGGGCCCGTGGCGGCCCTACCAGGCCCGCTGCACGCGGTGCTAAGGCTGCTGGTGGTGCTGCTTCTGGTAGGGTTAACTCCGGAGCCCGGGGCGCAACCGCTGCCAAGAAAGGCACTGCTTCTGGAAAATCCAGCAAATCCGATTCAGTTAATGGTGATGGTGATGATGGGAAGACAAAGAAGGGGCAATATGAAGGTCCTGATCCGGACTTAGCTGAGATGCTTGAAAGGGACGTGTTGGAGACGTCTCCCGGAGTGAGATGGGATGATGTTGCAGGCCTCACTGAAGCCAAGAGGCTTCTTGAAGAAGCTGTTGTCCTTCCATTATGGATGCCTGAGTATTTCCAGGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCCGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAACGCATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGAGGTGGCCCCTGATGTCAATATAGATGACGTGGCTCGCCGTACAGAAGGCTATAGTGGAGATGATTTGACAAATGTATGTCGTGATGCTTCCCTGAATGGTATGAGGCGTAAGATAGCGGGAAAAACACGCGATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCCTGTTGCTATGTGTGATTTTGAGGAAGCTTTGAAGAAAGTCCAGCGAAGTGTTTCTCAGGCTGACATCGAACGTCATGAGAAGTGGTTTACTGAATTTGGATCAGCATAA 1842 0.4962 KLLRVQSVTTPLTSSQRLSPNTKKPTKTPNQPLPKSQTRNSQGLSGHFTPPFTEFLPRRLNATVARPIPAAALQTRKKRRMSGASLTGLQDHLKLAREYALEGLYDTSIIFFDGAVAQINKHLNTVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKETPVGNGRRRPASPPISTKSNFVFQPLDEYPTSSSSGPGGPLDDPDVWRPPSRDDSRSGSGRRPVVSARGPTRKSQQDGAWARGGPTRPAARGAKAAGGAASGRVNSGARGATAAKKGTASGKSSKSDSVNGDGDDGKTKKGQYEGPDPDLAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALKKVQRSVSQADIERHEKWFTEFGSA* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2492 613 Pfam ATPase family associated with various cellular activities (AAA) 365 502 IPR003959 GO:0005524|GO:0016887
Amo07g2492 613 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 87 613 IPR028596 GO:0008017|GO:0008568|GO:0051013
Amo07g2492 613 ProSitePatterns AAA-protein family signature. 474 493 IPR003960 GO:0005524|GO:0016887
Amo07g2492 613 MobiDBLite consensus disorder prediction 1 48 - -
Amo07g2492 613 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 85 613 - -
Amo07g2492 613 Gene3D - 503 589 - -
Amo07g2492 613 SMART AAA_5 361 504 IPR003593 -
Amo07g2492 613 MobiDBLite consensus disorder prediction 289 309 - -
Amo07g2492 613 PANTHER AAA DOMAIN-CONTAINING 85 613 - -
Amo07g2492 613 MobiDBLite consensus disorder prediction 1 50 - -
Amo07g2492 613 CDD AAA 359 502 - -
Amo07g2492 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 316 599 IPR027417 -
Amo07g2492 613 Gene3D - 323 604 IPR027417 -
Amo07g2492 613 MobiDBLite consensus disorder prediction 159 309 - -
Amo07g2492 613 Pfam AAA+ lid domain 524 565 IPR041569 -
Amo07g2492 613 Gene3D - 83 160 - -
Amo07g2492 613 MobiDBLite consensus disorder prediction 173 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2492 Amo-Chr7 71754098 71757411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2492 317 605 Calmodulin-binding Proteins AT3G56690 40.000 8.05e-50 184