Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2476 ATGAACGTGGAATTGGAGCTCAACCACATATTCCATTATTTATGTAAAGAACTTGACATGAGGGGTTCTTCATATTCTCAGCCAGTTCCAAATGAATATCTACAAGATAATAATGATGTGGATGAAGAAGATGAGGAGCAGTTAGGAGAGGGTGAAGATGATGGTATAGATCGAAGAAATGGTTTTAGGATTTCCCAAAAGGATGCTGATGACAATGATGATGGGGAAGGTGACACAGATGGAGATGGAGATGGCAATAATCATGATGATAACATTGATGAAGCTAATGATGATAACCGGAAAATTCGTAACAATTTTCGGCTTTCCCAGAAGGATAACAATGATGATGAGGAAGGTGACACAGATGGAGATGGCAATGAGAATGATGATAACAATAATGAAGGTAATGATGATAACGATAACAGTCATGGCACTAAGATTGAAGATGGTTTGGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGGTATCTGCCTATGAACTTGCACCTCGGGTGCCAGCCCCATCAACTGTGGCTACCTCAGCTCCTAAACCATCTTCAGGTGGTAGGAATTCACTTACCGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCTTGGGGTGACCGGTTTCTTCAACGCGAAAGGAAGAGTCTTCGCTCTGATGAATGGCATGAAGTTGCAGACGAAGTATCAAAGGTTTCAAAAATTGATAGGACAGATACTCAGTGTAGAAATCGTATTGATACATTGAAGAAAAAATACAAAAAGGAGATCATGAAGTTTCCTGCAATGGGTGTTGGAAGTAGCAAATGGCTTTATTTCGAAAGGATGAATAAACTAATGTCTCCTCCACCACAGCAAACAAGTCTCTCCTGTGAAATGCAATCACAAAAGCATTCCGTTATTAACTCGAGAGTTAATTTGAACCATCCAAATGGAGTAGATAAGACGAGGAATAGTCCTGAGACTACAGAATCTACTAGCGAAGACGGTTCAATTGGGGCTCGTGGAAAGAAAAGGAAGAAAAGAAGATGCAATGATGGAGCTTGTTCATTCAGATTGCTAGCTGATTCCATTCATAAGTTCAGTAAGATATACGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGGTGGAGCTGGAAAGGATGAGGATGGATTTGCATAAGGAATTGGAGACACAGAAAAGGCAGATTTTGAAGAGAATGCAGAGTAAGATTTGGAAACTAGAGCAGGGAGATGACGAGAATGATGATGATTCTGCTGAAAATGGTATGTGA 1287 0.4025 MNVELELNHIFHYLCKELDMRGSSYSQPVPNEYLQDNNDVDEEDEEQLGEGEDDGIDRRNGFRISQKDADDNDDGEGDTDGDGDGNNHDDNIDEANDDNRKIRNNFRLSQKDNNDDEEGDTDGDGNENDDNNNEGNDDNDNSHGTKIEDGLEWHPKKQKLKSLVSAYELAPRVPAPSTVATSAPKPSSGGRNSLTDWTEHETFVLLDAWGDRFLQRERKSLRSDEWHEVADEVSKVSKIDRTDTQCRNRIDTLKKKYKKEIMKFPAMGVGSSKWLYFERMNKLMSPPPQQTSLSCEMQSQKHSVINSRVNLNHPNGVDKTRNSPETTESTSEDGSIGARGKKRKKRRCNDGACSFRLLADSIHKFSKIYEKIENSKRQQMVELERMRMDLHKELETQKRQILKRMQSKIWKLEQGDDENDDDSAENGM* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2476 428 MobiDBLite consensus disorder prediction 115 135 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 26 154 - -
Amo07g2476 428 ProSiteProfiles Myb-like domain profile. 197 254 IPR001005 -
Amo07g2476 428 Coils Coil 369 400 - -
Amo07g2476 428 Gene3D - 197 259 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 174 194 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 180 194 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 309 334 - -
Amo07g2476 428 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 107 427 IPR044823 -
Amo07g2476 428 MobiDBLite consensus disorder prediction 36 51 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 309 345 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 52 70 - -
Amo07g2476 428 Pfam Myb/SANT-like DNA-binding domain 196 283 IPR044822 -
Amo07g2476 428 MobiDBLite consensus disorder prediction 81 114 - -
Amo07g2476 428 PANTHER OS01G0718900 PROTEIN 107 427 - -
Amo07g2476 428 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2476 Amo-Chr7 71631990 71633695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2476 344 414 Trihelix Transcription Factor Family AT3G14180 41.667 1.23e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo07g2476 Myb_DNA-bind_4 5.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2476 - - ahf:112703693 711.835